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New Lineages of Life Group
Our research is focused on the discovery and characterization of novel bacterial, … learning to identify new divergent lineages and expand the Tree of Life. We then investigate the coding potential to … Schulz, C Abergel, T Woyke (2022) Giant virus biology and diversity in the era of genome-resolved metagenomics. Nature …
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Microbial Program
The JGI’s Microbial Program focuses on using cutting-edge sequencing, annotation and analysis … using advanced sequencing technologies to explore microbial diversity — with an emphasis on bacteria and archaea, and …
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Single Cell Research Group
… in 1985, which highlights our skewed understanding of microbial metabolism towards a minority of cultivated … still persists to date. Research Team    … Phylogenetic diversity estimates show that the gap between cultivated and … 2005. This gap is also reflected in the strongly biased representation of sequenced genomes in the public domain, …
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Metagenome Program
… genetic elements. Beyond exploring and characterizing microbial diversity, work in the Metagenome Program uses several … metagenomics and targeted gene searches to expand representation of uncultivated microbial lineages. Charting …
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Fungal & Algal Program
The Fungal & Algal Program explores the vast diversity of fungi and algae to unlock their potential for bioenergy, environmental sustainability, and bioproducts. By sequencing and … Program aims to streamline genome analysis workflows for microbial eukaryotes, build fungal and algal pangenomes, and …
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IMG Group
The IMG group owns and maintains integral components of JGI’s production workflow, and is responsible for the … genomic data and serving them to users via the Integrated Microbial Genomes & Microbiomes (IMG/M) system. Research …
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Partnerships: Adopt-A-Genome
… program for faculty to “claim” the JGI’s unpublished microbial genomes, with the expectation that faculty will work with undergraduates in the analysis and publication of the claimed genome sequences. This opportunity, provided …
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Microbiome Data Science Team
Biology is currently experiencing a revolution brought on by rapid developments in genomics and other … research.  These efforts include exploration of the global diversity of alternative genetic codes (Science 2014), … A global metagenomic map of urban microbiomes and antimicrobial resistance. Cell . 184(13):3376-3393 Almeida A, et …
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Environmental Genomics Group
Research in the Eloe-Fadrosh group focuses on using genome-resolved metagenomic approaches to identify … of metagenomes for signatures of viruses and novel microbial lineages, and reconstruct metabolic properties … Our aim is to more fully capture microbial and viral diversity, leading to a better understanding of microbial …
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Natural Prodcast Episode 13: Francisco Barona Goméz
… about natural products and the science and scientists of secondary metabolism. Hey everybody, this is Dan with episode … is that you could, therefore, expect a lot of chemical diversity. So many compounds will fulfill the same function. … UGA-Langebio in Irapuato, Mexico. His interests are in microbial diversity and evolution, particularly as how …
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Natural Prodcast Episode 10: A Primer on Genome Mining
… about natural products and the science and scientists of secondary metabolism. Welcome back for our second season of … Yeah, bacteria sound like a good place, to me, to look for diversity because there are so many bacteria, because it is … of the IMG data portal , which is a larger portal for microbial genomics. IMG stands for Integrated Microbial …
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Filling in the Plant Tree of Life
… plants and how they adapt to their ever-changing environments better? We could unlock new innovations to drive … crops. But most available genomes are from narrow swaths of the plant tree of life. One project aims to change that. …
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