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Fungal & Algal Program
… & Algal Program explores the vast diversity of fungi and algae to unlock their potential for bioenergy, environmental … into bioenergy and bioproducts. The program’s fungal genomics research explores new metabolic processes and … provides data access, visualization, and analysis tools for comparative genomics of fungi. Mycocosm enables users to …
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Natural Prodcast Episode 10: A Primer on Genome Mining
… fires here in California and, uh– ALISON TAKEMURA: I had snow. DAN UDWARY: You had snow already. Yeah, that’s crazy. … streams. This will all become clearer as we get into the genomics. So– ALISON TAKEMURA: I’m just enjoying the ride … bacteria, because it is so easy to sequence their genomes comparatively to especially plants. So yeah, so from there, …
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Secondary Metabolites Program
… of secondary metabolites across bacteria, fungi, algae and plants. These molecules, which are not essential … of secondary metabolites produced by bacteria, fungi, algae and plants. These compounds are key to organisms' … The Secondary Metabolites Program offers users extensive genomics, DNA synthesis and metabolomics capabilities to …
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Natural Prodcast Episode 24: Jackie Winter and SMC
… now– like last year, we had a great winter, so a lot of snowpack when it melted– or a lot of water when the snowpack … as many as it did and how that became sort of a trend in genomics. So anyway, yeah, JGI has been working in secondary … a BGC fragment can be useful in some way if you’re doing comparative analysis. We want to make sure we had everything …
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Partnerships: Adopt-A-Genome
… program is to: Build curiosity and illustrate the value of comparative genomic analysis Expose students to peer review … with some of the latest developments in microbial genomics, metagenomics, and computational biology, and to … from sequence data, employing IMG data and tools for comparative analysis, visualization and interpretation using …
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Natural Prodcast Episode 11: Marnix Medema
… of hooks into IMG’s data. IMG being Integrated Microbial Genomics at JGI, a large data set of bacterial genomes. And … And I think another key component is data integration with genomics with metabolomics and with transcriptomics because …
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Metagenome Program
… such as quantitative stable isotope probing (qSIP)-metagenomics and metatranscriptomics, to metagenomics and … The JGI supports microbiome data science by enabling comparative genomics and metagenomics analysis through the …   … The IMG/M system serves as a community resource for comparative analysis and annotation of all publicly …
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JGI Portals
… … The IMG/M system serves as a community resource for comparative analysis and annotation of all publicly … access, visualization, and analysis tools for comparative genomics of fungi. Mycocosm enables users to navigate across … and conduct comparative and genome-centric analyses of algae, while also encouraging community engagement and data …
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DNA Synthesis Program
The program has been a pioneering effort in functional genomics since 2012, with a focus on addressing critical … … The IMG/M system serves as a community resource for comparative analysis and annotation of all publicly … provides data access, visualization, and analysis tools for comparative genomics of fungi. Mycocosm enables users to …
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Natural Prodcast Episode 14: Nigel Mouncey
… about what are they doing. And so it’s really functional genomics. And there’s a lot of sequencing based approaches, … , like metabolomics , like some of the more directed genomics approaches, DAPseq and the stabilized isotope … core science programs which are microbes, and fungi, and algae plants, synthetic biology. And so we have, I think, …
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JGI@25
Celebrating 25 years of genomics research 2022 marked the JGI’s 25th anniversary. We … to advancing the frontiers of environmental and energy genomics. The two-story mural at the Integrative Genomics Building was painted by Berkeley-based artist Nigel …
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Natural Prodcast Episode 5: Brad Moore
… chemist, Richard Moore, and get into seaweed, robots, algae, and biocatalysis — and he makes fun of me a lot, … the mid-late ’80s. And at that time, you know, it’s before genomics existed. This is before we’re even thinking of … at plankton. Then we began looking at seaweeds, macro algae. And the list pretty much goes on. We’re looking at, …
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