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… With collaborative user projects, the JGI’s Plant Program delves into the natural world’s potential to address global challenges by exploring plants’ role in capturing carbon, detoxifying soils, interacting with other organisms, … energy into chemical energy — and its implications for carbon sequestration, renewable energy and agricultural …

… Plants are complex organisms that harbor a fantastic … and spatial transcriptomics barcode-based genetics (RB-TnSeq), and computational genomics to better understand the … Plant microbiomes hold the amazing ability to influence … is the modulation of their bacterial host to colonize plant roots, as with Arabidopsis thaliana. Using a coupled …

… of Arts and Sciences. She’s an ethnobotanist and the herbarium curator there, with a broad range of experimental … in the library now. It’s unique in that it is highly targeted towards, again, plants that are used in traditional … this. If you think about the classic OK, find and grind technique where you have your crude extract, you have …

… The Plant Program Advisory Committee is chartered to offer … on the effective management and strategic objectives of the plant program. The committee serves as the program's key …

… of energy and nutrient exchange, as well as microbial and plant responses to environmental changes. With advanced mass spectrometry techniques and computational tools, the program supports … biogeochemical processes, development of high performance plants and microbes, and understanding microbiome …

… Uncovering associations between plant roots and fungi that can help or harm plant host health. The Science Researchers compared the … Programme: Deconstruction and Reconstruction of the Plant Microbiota (SPP DECRyPT 2125)’ and the Cluster of … was also supported by the Laboratory of Excellence ARBRE (ANR- 11-LABX-0002-01), the Region Lorraine, the …

… this week is with Professor Brian Bachmann from Vanderbilt University’s Chemistry Department, where he is the PI … heterologous expression. You can do homologous expression techniques and stimulation techniques and that kind of … We can also genetically manipulate them. We can do strain improvements. We can do all sorts of things. So that’s just …

… and ergot alkaloids come from fungi, and Taxol from plants. Plants, fungi, bacteria, archaea, they all have … Frankia . And so the Frankia are bacteria that live in the root nodules of plants. And these guys were sequenced, and … But… DAN: Yeah, there are a lot of ways to put together carbon molecules. Chemistry is pretty limitless. All right, so …

… contigs. Assembly, annotation ( IMG ) Depends on project Plant and Algal Standard Draft Whole genome shotgun … these projects. Assembly, annotation for ( Phytozome for plant, Phycocosm for algae) depends on genome Plant and Algal Resequencing SNP and short indel calls, …

… that maps gene expression patterns in the  Arabidopsis root, profiling nearly 100,000 single root cells and … the largest integration of single-cell datasets in plants and provides a foundation for still larger efforts in diverse plant species beyond models,” he said. Cole annotated cell …

… a developer. So that has been also a journey of continuous improvement. Dan Udwary: What’s the development process … called “disease suppression”, where the microbiome of a plant, so the bacteria living on and inside the roots are protecting the plants against pathogens. So …

… in order to challenge or kill off competition, right? And plants do the same sorts of things. And then, bacteria often … is a soft metal and that if there were gold somewherenearby in the nearby hills, then you could determine that by … service to the secondary metabolite community. What other techniques are there for finding these biosynthetic gene …