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Publication Policy
The JGI has a strong interest in seeing that the data produced by the facility result in scientific publications. JGI users and collaborators have the right to … (see Auspice Statement below) for the generation of sequence or metabolomic data, DNA synthesized, and any …
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Natural Prodcast Episode 23: Aaron Puri
… … DAN: Hey, everybody. Welcome back for another episode of Natural Prodcast. Right now I’m working on this the … the answer would be that there’s actually a great deal of diversity within these methanotrophs for example, that are … up on previous Natural Prodcast episodes  here . Show Notes Publication: Suo Z et al. A Mesorhizobium japonicum quorum …
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Publications
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Microbial Program
The JGI’s Microbial Program focuses on using cutting-edge sequencing, annotation and analysis techniques to explore the vast and diverse world of microbes. Studying bacteria and archaea, including those … using advanced sequencing technologies to explore microbial diversity — with an emphasis on bacteria and archaea, and …
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Microbiome Data Science Team
… and other omics technologies.  The exponential growth of DNA sequencing data, coupled with recent computational … research.  These efforts include exploration of the global diversity of alternative genetic codes (Science 2014), … Science 344(6186):909-13 … Research Efforts … Selected Publications … For further details, please reach out to the …
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Natural Prodcast Episode 8: Eric Schmidt
… with animal metabolism itself, and it’s really amazing what diversity there is in animals. I think, even despite the … Dr. Schmidt is a natural products chemist who works in a wide variety of marine organisms, including sponges, … you’d like to read more about this, I highly recommend his publication last year, “The Biosynthetic Diversity of the …
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Single Cell Research Group
… still persists to date. Research Team    … Phylogenetic diversity estimates show that the gap between cultivated and uncultivated Bacteria and Archaea has steadily been widening since 2005. This gap is also reflected in the … … Research Interests … Former Lab Members … Selected Publications … For further details, please reach out to the …
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Partnerships: Adopt-A-Genome
… “Adopt a Genome” is an informal program for faculty to “claim” the JGI’s … faculty will work with undergraduates in the analysis and publication of the claimed genome sequences. This opportunity, provided …
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The Expanding Universe of Methane Metabolisms in Archaea
… genomes provide new insights into an ancient metabolism. Methane is a greenhouse gas 20 times more potent than carbon dioxide. Billions of years ago, methane-producing archaea likely played a key … in nearly all types of anaerobic environments suggest the diversity of methane metabolisms is “vastly underestimated.” …
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Metagenome Program
The Metagenome Program uses advanced sequencing technologies to decode the genomes of microbes in their natural environments. This work … elements. Beyond exploring and characterizing microbial diversity, work in the Metagenome Program uses several …
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Wide diversity of methane and short-chain alkane metabolisms in uncultured archaea
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Natural Prodcast Episode 13: Francisco Barona Goméz
… … DAN UDWARY: You’re listening to the Department of Energy Joint Genome Institute’s Natural Prodcast– a … is that you could, therefore, expect a lot of chemical diversity. So many compounds will fulfill the same function. … of natural product biosynthesis in bacteria ” The ActDES publication came out after we talked. It looks like a great …
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