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… strong constraints exerted by viruses. Research in the viral genomics group aims at improving our collective … Biotech .  37 , 29–37 Roux S, et al. (2016) Ecogenomics and potential biogeochemical impacts of globally abundant ocean viruses.  Nature . 537:689-93. … Selected Publications … For further information contact the Group …

JGI has a strong interest in seeing that the data produced by the facility result in scientific publications. JGI users and collaborators have the right to produce manuscripts for publication …

… cutting-edge sequencing, annotation and analysis techniques to explore the vast and diverse world of microbes. Studying … rich data such as inferred host taxonomy, conjugation potential, antibiotic resistance genes, and ecosystem … the largest publicly available collection of Uncultivated Viral Genomes, derived from genomes, metagenomes, and …

The Metagenome Program uses advanced sequencing technologies to decode the genomes of microbes in their natural … provides insights into microbial diversity and metabolic potential, with implications for energy production, … The Program also aims to build a global-scale catalog of viral, microbial, and microeukaryote genomes and mobile …

… “Adopt a Genome” is an informal program for faculty to “claim” the JGI’s unpublished microbial genomes, with the expectation that faculty will work with undergraduates in the analysis and publication of the claimed genome sequences. This …

… now I’m working on this the afternoon of the day I’m due to release it, which is not ideal for me keeping myself on … as many different ways as possible to access the chemical potential of these or any organisms. So developing good … up on previous Natural Prodcast episodes  here . Show Notes Publication: Suo Z et al. A Mesorhizobium japonicum quorum …

Research in the Woyke laboratory focuses on the utility of single-cell methods to access … gap. A primary goal is to get  insights into the coding potential of candidate phyla  to decipher their possible … … Research Interests … Former Lab Members … Selected Publications … For further details, please reach out to the …

… pathogens, and associated viruses that all contribute to a dynamic ecosystem. We are interested in how plants … Sai Prahabkar (UC Merced Intern) … Plant / Bacteria / Viral Interactions … Single-cell characterization of plant/environmental responses … Selected Publications … Research Team Alumni … For further details, …

… focuses on using genome-resolved metagenomic approaches to identify and characterize genomic information from … genomes. Our aim is to more fully capture microbial and viral diversity, leading to a better understanding of … Microbiology , 15032. 10.1038/nmicrobiol.2015.32 … Selected Publications … For further details, please reach out to the …

… annotation and analysis of (meta)genomic, (meta)transcriptomic, and functional genomic data and serving them to users via the Integrated Microbial Genomes & Microbiomes (IMG/M) system. Research … computed for nearly 28,000 bacterial and archaeal genomes. By clustering genomes based on their pairwise AF and ANI …