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Natural Prodcast Episode 11: Marnix Medema
… … Dan Udwary: You’re listening to the Department of Energy … it didn’t. However – and this was a proposal on synthetic biology of engineering gene expression in bacteria – … Did the global analysis of biosynthetic gene clusters across, well, at that time, all genomes that were out there. …
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Publication Policy
The JGI has a strong interest in seeing that the data produced by the facility result in scientific publications. JGI users and collaborators have the right to … jgi.doe.gov/portal/lookup?keyName=proposalId&keyValue=XXXXXX&groupOnly=1&app=Info where XXXXXX is the WIP proposal ID. …
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Natural Prodcast Episode 15: Katherine Duncan
… to do my PhD, I thought, right, I’m going to learn microbiology. So I went to– this was in 2008 by then. And I’ve … of paints the picture of– a lot of us say, well, we go to unusual places because biodiversity translates to Nobel … is a whole bunch of information that maybe never makes its publication. And these are little tips, you know, how to …
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Synthetic Biology Informatics Group
Software engineers in the Synthetic Biology Informatics Group develop, deploy, and maintain software that support …
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Single Cell Research Group
Research in the Woyke laboratory focuses on the utility of … the bulk of which belong to only three phyla. The Woyke group uses single-cell sequencing as a means to begin … … Research Interests … Former Lab Members … Selected Publications … For further details, please reach out to the …
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Viral Genomics Group
… big (or small) can tailed phages be?  Nature Reviews Microbiology.   19 , 407 Berg, M. et al. (2021) Host population … inoviruses revealed as pervasive in bacteria and archaea across Earth’s biomes. Nature Microbiology. 4 , 1895–1906 … abundant ocean viruses.  Nature . 537:689-93. … Selected Publications … For further information contact the Group …
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IMG Group
The IMG group owns and maintains integral components of JGI’s production workflow, and is responsible for the … fraction, AF) have been computed for nearly 28,000 bacterial and archaeal genomes. By clustering genomes based …
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Plant-Microbial Interactions Group
Plants are complex organisms that harbor a fantastic diversity … eventually construct a bioenergy plant single-cell atlas comprising Sorghum, Switchgrass, and Brachypodium datasets. … of plant/environmental responses … Selected Publications … Research Team Alumni … For further details, …
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New Lineages of Life Group
… and biogeochemical cycles. Research Team    … A complete publication list available at Google Scholar. Schulz, C Abergel, T Woyke (2022) Giant virus biology and diversity in the era of genome-resolved … reports. 5 (1), 1-10 Schulz et al. (2014) Life in an unusual intracellular niche: a bacterial symbiont infecting …
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Synthetic Biology Lab
The Synthetic Biology lab is divided into a DNA synthesis production group and a synthetic biology applications group. The DNA …
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Environmental Genomics Group
Research in the Eloe-Fadrosh group focuses on using … detection of microbial diversity . Nature Microbiology , 15032. 10.1038/nmicrobiol.2015.32 … Selected Publications … For further details, please reach out to the …
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Partnerships: Adopt-A-Genome
… “Adopt a Genome” is an informal program for faculty to … faculty will work with undergraduates in the analysis and publication of the claimed genome sequences. This … in microbial genomics, metagenomics, and computational biology, and to empower them with the knowledge and skills …
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