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Publication Policy
… The purpose of this policy is to establish communication norms around … recognized and credited for their work, while also adhering to the authorship policies of the journal in which the … that the data produced by the facility result in scientific publications. JGI users and collaborators have the right to …
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Microbial Program
… The JGI’s Microbial Program focuses on using cutting-edge sequencing, … analysis techniques to explore the vast and diverse world of microbes. Studying bacteria and archaea, including those … addressing key environmental challenges, such as improving soil health, carbon sequestration and bioeconomy …
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Partnerships: Adopt-A-Genome
… program for faculty to “claim” the JGI’s unpublished microbial genomes, with the expectation that faculty will work with undergraduates in the analysis and publication of the claimed genome sequences. This opportunity, provided … A primary purpose of this project is to bring educators from a broad range of …
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New Lineages of Life Group
… research is focused on the discovery and characterization of novel bacterial, archaeal and eukaryotic microbes and viruses in environmental sequence data. We use multi-omics (metagenomics, metatranscriptomics, single cell genomics and phylogenomics) and machine …
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Plant Microbial Interactions Group
… are complex organisms that harbor a fantastic diversity of cell types and associated organisms, including fungal and bacterial symbionts, detrimental microbial pathogens, and associated viruses that all … fungi, viruses. Resident viruses can be found in a myriad of bacterial strains, whereby they can modulate host …
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Publications
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Thermal adaptation of soil microbial growth traits in response to chronic warming
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Plant Program
… collaborative user projects, the JGI’s Plant Program delves into the natural world’s potential to address global … by exploring plants’ role in capturing carbon, detoxifying soils, interacting with other organisms, and adapting to … to current problems facing humanity. A major focus are biofuel feedstock species and plant-microbe interactions, …
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Environmental Genomics Group
… Research in the Eloe-Fadrosh group focuses on using genome-resolved … develop computational approaches to sift through thousands of metagenomes for signatures of viruses and novel microbial lineages, and reconstruct metabolic properties … gain insights into microbial interactions, evolution, and adaptation, ultimately informing strategies for …
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Metabolomics Program
… The JGI’s Metabolomics Program works to uncover the roles of small molecules in biological systems, linking them with … exploration of energy and nutrient exchange, as well as microbial and plant responses to environmental changes. With … the program supports foundational research related to soil nutrient cycling and health, terrestrial biogeochemical …
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Metagenome Program
… The Metagenome Program uses advanced sequencing technologies to decode the genomes of microbes in their natural environments. This work … genetic elements. Beyond exploring and characterizing microbial diversity, work in the Metagenome Program uses … Program focuses on the high-throughput sequencing of microbial communities to uncover the complex interactions …
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Single Cell Research Group
… Research in the Woyke laboratory focuses on the utility of … in 1985, which highlights our skewed understanding of microbial metabolism towards a minority of cultivated … gap is also reflected in the strongly biased representation of sequenced genomes in the public domain, the bulk of which …
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