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Publication Policy
… contributions, ensure that all contributors to a research project are appropriately recognized and credited for their … that the data produced by the facility result in scientific publications. JGI users and collaborators have the right to produce manuscripts for publication and the responsibility for leading the efforts …
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Programs & Platform Leads
… Science User Facility, the JGI plays a leadership role in providing genome science capabilities to support BER's … of complex biological, earth, and environmental systems for energy and infrastructure security. In … Science Program, JGI researchers drive innovations that cross the boundaries of the Plant, Fungal, Algal, Microbial, …
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Biodesign
…   The Joint Genome Institute's Biodesign Platform capabilities support researchers exploring how to … whole chromosomes for bioenergy, nutrient cycling and bioproduct applications.  The team has three subgroups: … data science tools for workflow management and novel automations for DNA design, assembly and analysis Overview …
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Sequencing Technologies & Products
…   Our Sequencing Technologies Group is well-integrated across JGI departments to ensure a robust offering of sequencing capabilities and products to our users. This includes scaling the … functional genomics, scaling capacity through end-to-end automation — and further advancing sequence applications, …
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Publications
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Partnerships: Adopt-A-Genome
… “Adopt a Genome” is an informal program for faculty to “claim” the JGI’s unpublished … faculty will work with undergraduates in the analysis and publication of the claimed genome sequences. This … Adopt-a-Genome has: ~20 faculty from institutions across the country Efforts in ongoing curriculum development …
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How To Use Our Systems
… One of the JGI’s key assets is our user community, comprising a broad range of researchers and trainees who use … have yielded numerous, high-quality outputs, such as data, publications and software. The JGI supports the entire data … and connect our data to the broader biological data ecosystem. Our community of data-downloading users spans tens …
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Metabolomics
… technologies at the JGI by identifying the actual molecules present in an environment that influence system behavior.  Through this identification, metabolomics … of new molecules and pathways. The JGI Metabolomics Platform delivers rich metabolite profiles from diverse …
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Institutional User Agreements
… Every approved proposal starts with a User Agreement — before any work can … must have their home/employing institution sign a JGI Non-Proprietary User Agreement and Appendix. An Appendix … rights in technical data, project reporting to the DOE, and publication requirements. An official with authority is …
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Partnerships: Myco-Ed
… (CURE) that consists of coordinated hands-on experiments across fungal biology teaching labs. The purpose of the program is to: train students and professors in laboratory techniques and data analyses compile original … Beyond providing a scalable solution for production of high-quality …
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Metabolomics Program
… The JGI’s Metabolomics Program works to uncover the roles of small molecules in biological systems, linking them with genomic data to enhance our … fuels the discovery  of novel metabolites, genes, and proteins. It also enables exploration of energy and nutrient …
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Secondary Metabolites Program
…   The JGI’s Secondary Metabolites Program focuses on the exploration of secondary metabolites across bacteria, fungi, algae and plants. These molecules, which are not essential for fundamental growth, provide critical advantages to the organisms producing them, …
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