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… that the data produced by the facility result in scientific publications. JGI users and collaborators have the right to … (see Auspice Statement below) for the generation of sequence or metabolomic data, DNA synthesized, and any other contributions, such as …

The JGI’s DNA Synthesis Program supports a wide range of projects, from single-gene synthesis to the synthesis of … context.  … The MycoCosm web portal provides data access, visualization, and analysis tools for comparative genomics … descendants of ancestral genes are constructed at key phylogenetic nodes. These families allow easy access to …

When submitting sequences to the JGI DNA Synthesis program, please include … are several easy-to-use open source tools for converting DNA sequence files into well-formed GenBank files. ApE is an … add the characters “.gb” (no quotes, just .gb) to the end of your file name. …

… — before any work can begin, including the submission of samples for sequencing, or the submission of sequencing … rights in technical data, project reporting to the DOE, and publication requirements. An official with authority is … ACADEMIC, NON-PROFIT or COMMERCIAL PROPOSALS with MULTIPLE COLLABORATORS: The submitting researcher’s home …

The JGI has diverse capabilities in: DNA and RNA sequencing, Sample and library preparation, DNA … Mass spectrometry based metabolomics Below is a table of standard product offerings, including a description of … DNA Synthesis Constructs <5kb in size Single gene or multiple small genes assembled to less than 5kb in length, …

… and other omics technologies.  The exponential growth of DNA sequencing data, coupled with recent computational … technology advances in management, processing and visualization of “big data,” and artificial … Science 344(6186):909-13 … Research Efforts … Selected Publications … For further details, please reach out to the …

… faculty will work with undergraduates in the analysis and publication of the claimed genome sequences. This opportunity, provided … employing IMG data and tools for comparative analysis, visualization and interpretation using public datasets.  … …

Below is a brief description of the process needed to prepare and ship samples for … Review JGI sample QC requirements and protocols Obtaining DNA and RNA of suitable quantity and quality has been the … pipelines.  You will receive automated emails as raw sequence data becomes available, and as analysis is …

Data produced and released by the US Department of Energy (DOE) Joint Genome Institute (JGI) are subject to … PIs or co-PIs) who wish to include use-restricted data in publications, or who wish to redistribute data in any way … use-restricted data. JGI proposals typically include multiple projects of different types which can span several …

The DNA Synthesis Science User Advisory Committee is chartered … on the effective management and strategic objectives of the programs. The Committee serves as the Program's key external advisory panels and advocates of Program strategy, operations, and scientific relevance …

… are complex organisms that harbor a fantastic diversity of cell types and associated organisms, including fungal and … and are influenced by microbial partners. We use a variety of genomics-powered tools to study this complexity, … of plant/environmental responses … Selected Publications … Research Team Alumni … For further details, …