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… that the data produced by the facility result in scientific publications. JGI users and collaborators have the right to … (see Auspice Statement below) for the generation of sequence or metabolomic data, DNA synthesized, and any other contributions, such as assembly, analysis, annotation, verification, creation of genome …

… focuses on using cutting-edge sequencing, annotation and analysis techniques to explore the vast and diverse world of microbes. Studying bacteria and archaea, including those … and archaeal lineages to improve phylogenetic analysis, metagenomic annotations, and function distribution. These …

… uses advanced sequencing technologies to decode the genomes of microbes in their natural environments. This work … Metagenome Program combines large-scale, time-series metagenomic data with detailed characterization of model … tools and visualization resources that support user analysis of biogeochemically-relevant pathways, enabling …

… that faculty will work with undergraduates in the analysis and publication of the claimed genome sequences. This … with some of the latest developments in microbial genomics, metagenomics, and computational biology, and to empower them …

The IMG group owns and maintains integral components of JGI’s production … workflow, and is responsible for the annotation and analysis of (meta)genomic, (meta)transcriptomic, and …

… in the Eloe-Fadrosh group focuses on using genome-resolved metagenomic approaches to identify and characterize genomic … Dariia et al. (2023)  A standardized quantitative analysis strategy for stable isotope probing metagenomics … Microbiology , 15032. 10.1038/nmicrobiol.2015.32 … Selected Publications … For further details, please reach out to the …

… synthesis, and metabolomics at the JGI for projects of relevance to Department of Energy (DOE)  Mission Areas . … accepted proposals, sequencing, synthesis, metabolomics and analysis will be performed by the JGI at no cost to the … more customized analysis, the JGI also participates in publication of results. See more details on our Review …

Micro-Scale Applications group explores the genetic makeup of natural microbial communities using a variety of … offers the first quantitative Stable Isotope Probing (SIP) Metagenomics pipeline that utilizes internal analytical … cutting-edge cell sorting, DNA amplification, and sequence analysis to recover the genomes of uncultivated microbes. We …

… … DAN: Hey, everybody. Welcome back for another episode of … up on previous Natural Prodcast episodes  here . Show Notes Publication: Suo Z et al. A Mesorhizobium japonicum quorum …

The JGI has diverse capabilities in: DNA and RNA sequencing, Sample … Mass spectrometry based metabolomics Below is a table of standard product offerings, including a description of … cycle times from sample receipt to completion of standard analysis.  Raw data is provided for all sequencing products …

… artificial Intelligent/machine learning approaches in data analysis and interpretation is creating new opportunities … (2023) Unraveling the functional dark matter through global metagenomics. Nature . 622(7983):594-602. Camargo AP. et al. … Science 344(6186):909-13 … Research Efforts … Selected Publications … For further details, please reach out to the …