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… strong constraints exerted by viruses. Research in the viral genomics group aims at improving our collective … of ecological and evolutionary parameters driving virus:host dynamics in environmental microbial communities. This … abundant ocean viruses.  Nature . 537:689-93. … Selected Publications … For further information contact the Group …

The JGI has a strong interest in seeing that the data produced by the facility result in scientific publications. JGI users and collaborators have the right to produce manuscripts for publication and the responsibility for leading the efforts …

… work encompasses bacteria, archaea, and micro-eukaryoes, along with their associated viruses and mobile genetic … The Program also aims to build a global-scale catalog of viral, microbial, and microeukaryote genomes and mobile genetic elements, linked to custom interfaces and visualization tools for user …

… “Adopt a Genome” is an informal program for faculty to … faculty will work with undergraduates in the analysis and publication of the claimed genome sequences. This … genomes (MAGs), and 40,000+ metagenomes along with curated environmental- and other metadata to …

… addressing key environmental challenges, such as improving soil health, carbon sequestration and bioeconomy … metatranscriptomes. It provides rich data such as inferred host taxonomy, conjugation potential, antibiotic resistance … the largest publicly available collection of Uncultivated Viral Genomes, derived from genomes, metagenomes, and …

So a lot of my work is as focused on insects As a host, and a little bit of my newer work is focused on … for antibiotics and the microbes that make them is in the soil. There’s … uh… there’s an issue there though, in that … new antibiotics and assess whether something you have is linked to the killing you see against the pathogen is new or …

… the future. So, then we were using these probes to look at host pathogen interactions mostly with like enteric … up on previous Natural Prodcast episodes  here . Show Notes Publication: Suo Z et al. A Mesorhizobium japonicum quorum sensing circuit that involves three linked genes and an unusual acyl-homoserine lactone signal . …

The JGI’s Metabolomics Program works to uncover the roles of small … the program supports foundational research related to soil nutrient cycling and health, terrestrial biogeochemical … and bioenergy development. … EcoFABs:  For studying microbe-host (or plant-microbiome) interactions under controlled …

… genomes. Our aim is to more fully capture microbial and viral diversity, leading to a better understanding of … ecosystem function.  The Environmental Genomics group also hosts the Viral Genomics group . Research Team    … Nayfach … Microbiology , 15032. 10.1038/nmicrobiol.2015.32 … Selected Publications … For further details, please reach out to the …

… but instead it’s two interviews in one. My new co-host, Jackie Winter, has been on a few episodes now, and I … And I think a lot of times, too, when we even look at publications, it’s always positive data, right? No one ever … genome right now. But eventually, it will be– it could be a viral sequence. It could be a contig. It could be whatever …

… (Science 2014), unearthing hundreds of thousands of new viral genomes and their predicted hosts (Nature 2016, Science 2017, Nature Microbiology 2018), … Science 344(6186):909-13 … Research Efforts … Selected Publications … For further details, please reach out to the …