Skip to main content
Logo
Logo Logo

Header Utility Nav

  • Mission
  • Science Programs
  • Who We Are
  • Data Policy & Support
  • Contact

Main navigation

  • Analyze Data
    • JGI Portals
      All the data we generate are publicly available
    • Data Ecosystem
      Meet our data partners
    • How to Use Our Systems
      Learn more about navigating JGI portals
  • Work With Us
    • User Programs
      Learn more about our proposal calls
    • Offerings & Capabilities
      Learn how the JGI can advance your science
    • Educational Partnerships
      Empowering the next generation of researchers
    • Events
      JGI-hosted meetings, seminars, workshops and more
  • User Stories
    • Science Stories
      Read about JGI-enabled user research
    • Genome Insider
      Our podcast features users discovering the expertise encoded in our environment
    • Announcements
      The latest news on new users, projects and JGI scientists
    • Publications
      Search user publications by year, program and proposal type
    • Approved Proposals
      Find a list of previously-accepted proposals

Main navigation

  • Analyze Data
    • Menu
    • JGI Portals
      All the data we generate are publicly available
    • Data Ecosystem
      Meet our data partners
    • How to Use Our Systems
      Learn more about navigating JGI portals
  • Work With Us
    • Menu
    • User Programs
      Learn more about our proposal calls
      • CSP Overview
      • FICUS Overview
      • Special Initiatives & Programs
      • Partnerships Development Team
    • Offerings & Capabilities
      Learn how the JGI can advance your science
      • Products
      • Sequencing
      • Synthesis
      • Metabolomics
    • Educational Partnerships
      Empowering the next generation of researchers
    • Events
      JGI-hosted meetings, seminars, workshops and more
  • User Stories
    • Menu
    • Science Stories
      Read about JGI-enabled user research
    • Genome Insider
      Our podcast features users discovering the expertise encoded in our environment
    • Announcements
      The latest news on new users, projects and JGI scientists
    • Publications
      Search user publications by year, program and proposal type
    • Approved Proposals
      Find a list of previously-accepted proposals

Header Utility Nav

  • Mission
  • Science Programs
    • Menu
    • DNA Synthesis Program
    • Fungal & Algal Program
    • Metabolomics Program
    • Metagenome Program
    • Microbial Program
    • Plant Program
    • Secondary Metabolites Program
  • Who We Are
    • Menu
    • Leadership
    • Program & Platform Leads
      • Environmental Genomics
      • IMG Group
      • Metabolomics Technology
      • Micro-Scale Applications
      • Microbiome Data Science
      • New Lineages of Life
      • Plant Microbial Interactions
      • Single Cell Research
      • Strain Engineering
      • Synthetic Biology Informatics
      • Synthetic Biology Lab
      • User Support Analysis
      • Viral Genomics Group
    • Committees
      • JGI User Executive Committee
      • Scientific Advisory Committee
      • DNA Synthesis Science User Advisory Committee
      • Fungal & Algal Program User Advisory Committee
      • Informatics Advisory Committee
      • Plant Program User Advisory Committee
      • Prokaryote Program User Advisory Committee
      • Secondary Metabolites Advisory Committee
  • Data Policy & Support
    • Menu
    • Project Management Office
    • Data Policy
  • Contact

Breadcrumb

  1. Home
  2. Search

Search

Results


Publication Policy
… that the data produced by the facility result in scientific publications. JGI users and collaborators have the right to … and the responsibility for leading the efforts to do so, and JGI expects acknowledgment (see Auspice Statement … include those DOIs in the supplemental materials for your publication. … Proposal DOIs can be found at the top of …
Learn more
Plant Program
… current problems facing humanity. A major focus are biofuel feedstock species and plant-microbe interactions, advancing … around the globe to identify genes to improve our domesticated species.  The program supports the development … the ability to discover syntenic orthologs, generate publication quality graphics and explore pangenome views of …
Learn more
Natural Prodcast Episode 17: Cassandra Quave
… many hats. So I just want to give you a chance to introduce yourself. CASSANDRA QUAVE: OK, great. Well, hey, it’s so … I think on COVID that we’re getting ready to submit for publication and have found some interesting hits for that as … got the podcast. If you have a question, or want to give us feedback, tweet us @JGI or to me @danudwary. That’s D-A-N …
Learn more
Natural Prodcast Episode 6: Marc Chevrette
This is a conversation with Marc Chevrette. Marc is a postdoc in Jo Handelsman’s group at the University of Wisconsin, … about that world, you know, what is going on? In one of your favorite examples of a secondary metabolite producer, … with large collections of new microbes and new activities, feeds into some of your other research interests, Mark, …
Learn more
Microbiome Data Science Team
… data science.  Research in the Kyrpides group focuses on Microbiome Data Science and analysis of Big Data. The … Biology  12(8):e1001920 Ivanova N. et al. (2014) Stop Codon Reassignments in the Wild. Science 344(6186):909-13 … Research Efforts … Selected Publications … For further details, please reach out to the …
Learn more
Natural Prodcast Episode 5: Brad Moore
… pretty darn cool to have that legacy and that running in your family. Dan: So tell me about that. What sparked it? I … called Salinospora . This new genus was discovered by friends and colleagues at the Scripps Institution of … got the podcast. If you have a question, or want to give us feedback, tweet us @JGI, or to me @danudwary. If you want to …
Learn more
Natural Prodcast Episode 2: The Primer, Part 2
… but there’s still almost certainly unusual things that we don’t recognize, because the only way to find things is by … have definitely learned a valuable historical lesson. Know your secondary metabolites!  DAN: One of the things that I … got the podcast. If you have a question, or want to give us feedback, tweet us @JGI, or to me @danudwary. If you want to …
Learn more
Feed Your Friends: Do Plant Exudates Shape the Root Microbiome?
Learn more
Natural Prodcast Episode 4: Nancy Keller
… 3 here ), which you should be able to find earlier in the feed, the secondary metabolism field has been dominated for … corn if they’re not stored properly. And so I read lots of your papers when I was in graduate school.    NANCY: Forced … is just because you see a cluster – I mean, I talk with my friends all the time on this – is it expressed? What if it’s …
Learn more
Natural Prodcast Episode 10: A Primer on Genome Mining
… and how we do it here and maybe give an example of a recent publication. ALISON TAKEMURA: Awesome. Yeah, let’s dive in, … 70:3 ALISON TAKEMURA: And so did you succeed in finding your vein of gold with aflatoxin? DAN UDWARY: Oh, yeah. … of the problem, and then how machine learning, because it feeds on so much data, right, to learn features of interest. …
Learn more
Metabolomics Program
… of energy and nutrient exchange, as well as microbial and plant responses to environmental changes. With advanced mass … in living systems, particularly as they relate to DOE missions in the bioeconomy, sustainability, and … structures involved in DOM cycling. ENVnet can be used in your custom Python applications but highly recommend using …
Learn more
Natural Prodcast Episode 11: Marnix Medema
… early this summer, then it was– well, I think the day your visit was planned was just a few days before the due … I needed more people to work on things, and to actually do some chemistry. And a few months after I submitted one of … the quantity is up to standard, and maybe it gives you some feedback as a developer. And then when it’s, well, when the …
Learn more

Pagination

  • Page 1
  • Page 2
  • Page 3
  • Page 4
  • Page 5
  • Page 6
  • Page 7
  • Page 8
  • Page 9
  • …
  • Next page ››
  • Last page Last »
Logo
  • LinkedIn
  • X
  • Bluesky
  • Youtube
Subscribe to our Newslettermail icon

JGI Footer

  • About
  • Contact
  • Careers
  • Media

Analyze Data Footer

  • Analyze Data
  • JGI Portals
  • Data Ecosystem
  • How to Use Our Systems

Work With Us Footer

  • Work With Us
  • User Programs
  • Offerings & Capabilities
  • Educational Partnerships
  • Events

User Science Footer

  • User Stories
  • Science Stories
  • Genome Insider
  • Announcements
  • Publications
  • Approved Proposals
© 1997-2025 The Regents of the University of California

JGI Footer Utility

  • Disclaimer
  • Accessibility / Section 508 Statement
  • Archives
  • Site Feedback
Logo

Berkeley Footer

  • Contact
  • Visit Us
  • Subscribe
  • X
  • LinkedIn
  • Instagram
  • Facebook
  • Youtube
Logo
Lawrence Berkeley National Laboratory is a U.S. DOE Office of Science
national laboratory managed by the University of California.

Berkeley Footer Utility

  • Staff Directory
  • For Employees
  • Emergency Status
  • Privacy & Security Notice
  • Site Feedback