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… Research in the Woyke laboratory focuses on the utility of single-cell methods to access genetic material of uncultivated taxa … The “Great Plate-Count Anomaly” first described by Stanley and Konopa in 1985, which highlights our skewed … of which belong to only three phyla. The Woyke group uses single-cell sequencing as a means to begin filling this gap. …

… focus on expanding molecular capabilities and functional genomics, scaling capacity through end-to-end automation — and further advancing sequence applications, single cell genomics, biodesign, and metabolomics capabilities.    … offers quantitative Stable Isotope Probing (SIP) Metagenomics to the broader scientific community. The pipeline …

… is published. The JGI expects that the data produced by the facility result in scientific publications. JGI users and collaborators have the right to produce manuscripts for publication and the responsibility for leading the efforts … the authorship list based on the contributor list provided by JGI. …

… communities and ecosystem function.  The Environmental Genomics group also hosts the Viral Genomics group . Research Team    … our understanding of microbial ecology and metabolism by elucidating the functional potential of hard-to-culture … in various environments and their potential applications. By recovering population genomes from metagenomes, we gain …

… in environmental sequence data. We use multi-omics (metagenomics, metatranscriptomics, single cell genomics and phylogenomics) and machine learning to … Exploring the fascinating world of giant viruses, which … possess genomes and particle sizes that rival those of cellular organisms. Giant viruses challenge the traditional …

… however they do so under strong constraints exerted by viruses. Research in the viral genomics group aims at improving our collective … mechanisms involved in virus:host interaction and host cell take-over by viruses, and attempts to evaluate … to address this question in natural soil ecosystems by combining metagenomics with other omics approaches, …

… faculty will work with undergraduates in the analysis and publication of the claimed genome sequences. This opportunity, provided by the Joint Genome Institute, builds upon thousands of microbial genomes that have been sequenced by the JGI though not formally analyzed or published.  The …

… technology in order to enhance the quality of single-cell genomes and directly link functional information with individual cells. Research Team    … the first quantitative Stable Isotope Probing (SIP) Metagenomics pipeline that utilizes internal analytical … The JGI provides users access to cutting-edge cell sorting, DNA amplification, and sequence analysis to …

… the natural world’s potential to address global challenges by exploring plants’ role in capturing carbon, detoxifying … carbon, helping to regulate Earth's carbon balance, to exploring the genetic basis of how plants have naturally … supports the development of next-generation biofuels by studying perennial grasses and fast-growing trees as …

… Biology is currently experiencing a revolution brought on by rapid developments in genomics and other omics technologies.  The exponential … types) (Nature Communications 2017, Science 2018, Molecular Cell 2019) and massive reconstruction of genomes from … Harrington LB, et al (2018) Programmed DNA destruction by miniature CRISPR-Cas14 enzymes. Science …

… associated viruses and mobile genetic elements. Beyond exploring and characterizing microbial diversity, work in … approaches to assess microbial activity across ecosystems.  By studying microbial communities and their interactions, … environmental sustainability, and many other applications. By understanding how microbes contribute to ecosystem …