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The JGI has a strong interest in seeing that the data produced by the facility result in scientific publications. JGI users and collaborators have the right to …

Genomics call is to enable users to perform state-of-the-art functional genomics research and to help them translate genomic information into biological function.  The emphasis is on … synthesis, metabolomics and analysis will be paid for by the Department of Energy’s funding of the JGI. There is …

… fantastic diversity of cell types and associated organisms, including fungal and bacterial symbionts, detrimental … of their bacterial host to colonize plant roots, as with Arabidopsis thaliana. Using a coupled experimental and … of plant/environmental responses … Selected Publications … Research Team Alumni … For further details, …

… “Adopt a Genome” is an informal program for faculty to “claim” the JGI’s … faculty will work with undergraduates in the analysis and publication of the claimed genome sequences. This opportunity, provided by the Department of Energy Joint Genome Institute, builds …

The JGI’s Microbial Program focuses on using cutting-edge sequencing, annotation and analysis … datasets, particularly for uncultivated microorganisms, by sequencing large populations of bacteria and archaea in … linking strain-level genetic variation to ecological niche adaptations.  Single cell sequencing approaches are also …

The Metagenome Program uses advanced sequencing technologies to decode the genomes of microbes in their … along with their associated viruses and mobile genetic elements. Beyond exploring and characterizing … approaches to assess microbial activity across ecosystems.  By studying microbial communities and their interactions, …

… growth, provide critical advantages to the organisms producing them, and are often involved in defense, nutrient … underexplored reservoir of secondary metabolites produced by bacteria, fungi, algae and plants. These compounds are … synthesis. The Secondary Metabolites Program offers users extensive genomics, DNA synthesis and metabolomics …

Research in the Woyke laboratory focuses on the utility of … The “Great Plate-Count Anomaly” first described by Stanley and Konopa in 1985, which highlights our skewed … … Research Interests … Former Lab Members … Selected Publications … For further details, please reach out to the …

See below for examples of successful Letters of Intent to our Community Science … PIs who drafted them.  … Elucidating Sphagnum microbiome genetic interactions for improved growth at elevated …

Synthesis Program supports a wide range of projects, from single-gene synthesis to the synthesis of entire chromosomes, … the program enables the design and synthesis of complex genetic pathways and biosystems. It The program fosters … program supports cutting-edge research in synthetic biology by synthesizing genes, pathways, and whole chromosomes for …

Research in the Eloe-Fadrosh group focuses on using genome-resolved … Ladau, J. et al. (2019)  Spatial, Temporal, and Phylogenetic Scales of Microbial Ecology . Trends Microbiol. … Microbiology , 15032. 10.1038/nmicrobiol.2015.32 … Selected Publications … For further details, please reach out to the …