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Publication Policy
… that the data produced by the facility result in scientific publications. JGI users and collaborators have the right to produce manuscripts for publication and the responsibility for leading the … Genome Institute ( https://ror.org/04xm1d337 ) and the Environmental Molecular Sciences Laboratory ( …
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Microbial Program
The JGI’s Microbial Program focuses on using cutting-edge sequencing, … inter-organismal interactions. These insights are crucial for addressing key environmental challenges, such as improving soil health, …
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Partnerships: Adopt-A-Genome
… “Adopt a Genome” is an informal program for faculty to “claim” the JGI’s unpublished … faculty will work with undergraduates in the analysis and publication of the claimed genome sequences. This … genomes (MAGs), and 40,000+ metagenomes along with curated environmental- and other metadata to enable comprehensive …
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Environmental Genomics Group
… approaches to identify and characterize genomic information from uncultivated microbes and viruses. We develop … of microbial communities and ecosystem function.  The Environmental Genomics group also hosts the Viral Genomics … Microbiology , 15032. 10.1038/nmicrobiol.2015.32 … Selected Publications … For further details, please reach out to the …
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Publications
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Plant Program
… soils, interacting with other organisms, and adapting to environmental changes. The program lays the groundwork for sustainable solutions to current problems facing … the ability to discover syntenic orthologs, generate publication quality graphics and explore pangenome views of …
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IMG Group
… components of JGI’s production workflow, and is responsible for the annotation and analysis of (meta)genomic, … genomic data and serving them to users via the Integrated Microbial Genomes & Microbiomes (IMG/M) system. Research … and ANI values, we were able to ascertain mis-assignment of species names in genomes spanning nearly 18% of all existing …
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Aquifer environment selects for microbial species cohorts in sediment and groundwater
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Natural Prodcast Episode 15: Katherine Duncan
I think it must’ve been about 2001, maybe, and so it was before smartphones and before laptops and everything. And I … actinomycetes form spores and can reside in really tough environments kind of adds a fascination from a biological … is a whole bunch of information that maybe never makes its publication. And these are little tips, you know, how to …
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Single Cell Research Group
… material of uncultivated taxa of interest. One such effort is targeted at environmental cells that are from candidate phyla, major … … Research Interests … Former Lab Members … Selected Publications … For further details, please reach out to the …
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Natural Prodcast Episode 23: Aaron Puri
… … DAN: Hey, everybody. Welcome back for another episode of Natural Prodcast. Right now I’m … doing unless there’s enough of them around to affect their environment. So I think the classical example yeah, is … up on previous Natural Prodcast episodes  here . Show Notes Publication: Suo Z et al. A Mesorhizobium japonicum quorum …
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Mission
… of Science user facility supported by the Biological and Environmental Research program, the Joint Genome Institute … and resources. Our vision is to lead genomic innovation for a sustainable bioeconomy. ALL PROPOSALS must support the … went on to advance basic science by sequencing scores of microbial species as well as several model organisms and …
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