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… The JGI’s Microbial Program focuses on using cutting-edge sequencing, annotation and analysis techniques to explore the vast and diverse world of microbes. Studying bacteria and archaea, including those … improving soil health, carbon sequestration and bioeconomy applications. The program provides high-quality, large-scale …

… The purpose of this policy is to establish communication norms around … that the data produced by the facility result in scientific publications. JGI users and collaborators have the right to … (see Auspice Statement below) for the generation of sequence or metabolomic data, DNA synthesized, and any other …

… well-integrated across JGI departments to ensure a robust offering of sequencing capabilities and products to our … through end-to-end automation — and further advancing sequence applications, single cell genomics, biodesign, and … An assay used for profiling transcription factor binding sites across entire …

… faculty will work with undergraduates in the analysis and publication of the claimed genome sequences. This opportunity, provided by the Joint Genome … A primary purpose of this project is to bring educators from a broad range of … necessary to extract meaningful biological insights from sequence data, employing IMG data and tools for comparative …

… research is focused on the discovery and characterization of novel bacterial, archaeal and eukaryotic microbes and viruses in environmental sequence data. We use multi-omics (metagenomics, … trove full of novel genes ready to be tapped for downstream applications. …

… Research in the Eloe-Fadrosh group focuses on using genome-resolved … develop computational approaches to sift through thousands of metagenomes for signatures of viruses and novel microbial lineages, and reconstruct metabolic properties … on their roles in various environments and their potential applications. By recovering population genomes from …

… The Micro-Scale Applications group explores the genetic makeup of natural microbial communities using a variety of cutting-edge approaches.  Our group also … The JGI uniquely offers the first quantitative Stable Isotope Probing (SIP) Metagenomics pipeline that utilizes internal …

… Biodesign and pathway engineering Mass spectrometry based metabolomics Below is a table of standard product offerings, including a description of … sequencing products below. In addition, JGI will submit raw sequence data to  SRA at NCBI once the standard analysis is …

… Research in the Woyke laboratory focuses on the utility of single-cell methods to access genetic material of uncultivated taxa of … gap is also reflected in the strongly biased representation of sequenced genomes in the public domain, the bulk of which … recent effort in the Woyke lab is therefore focused on the application of  function-driven single-cell genomics . Here, …

… The Metagenome Program uses advanced sequencing technologies to decode the genomes of microbes in their natural environments. This work … production, environmental sustainability, and many other applications. By understanding how microbes contribute to … Program focuses on the high-throughput sequencing of microbial communities to uncover the complex interactions …

… When submitting sequences to the JGI DNA Synthesis program, please include the following items: … Sequence files for all constructs should be emailed to  … well-formed GenBank files. ApE is an open source desktop application written by M. Wayne Davis or commercial options …