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With collaborative user projects, the JGI’s Plant Program delves into the natural world’s potential to … to environmental changes. The program lays the groundwork for sustainable solutions to current problems facing … in the DOE Bioenergy Research Centers. The  Plant Gene Atlas initiative develops gene expression catalogs across …

… at   Humboldt Universität zu Berlin   has developed an atlas that maps gene expression patterns in the  Arabidopsis root, profiling nearly 100,000 single root cells and … the largest integration of single-cell datasets in plants and provides a foundation for still larger efforts in …

… of the process needed to prepare and ship samples for sequencing by the JGI.  Additionally it includes instructions on accessing sample-level reports and tracking statuses.  Please follow the steps outlined below. … quantity and quality has been the rate-limiting step for many projects at the JGI. The quality of the starting …

Plants are complex organisms that harbor a fantastic … is the modulation of their bacterial host to colonize plant roots, as with Arabidopsis thaliana. Using a coupled … We will eventually construct a bioenergy plant single-cell atlas comprising Sorghum, Switchgrass, and Brachypodium …

… … Dan Udwary: Hey everybody! Welcome back for Natural Prodcast episode 17. The guest we have this week … curator there, with a broad range of experimental work on plants for drug discovery in antibiotics, anticancer, and … in bacteria as well. Yeah. DAN UDWARY: Yeah. Yeah, common root.  ALISON TAKEMURA: And so is that how your ethnobotany …

The Plant Program Advisory Committee is chartered to offer … on the effective management and strategic objectives of the plant program. The committee serves as the program's key …

Uncovering associations between plant roots and fungi that can help or harm plant host health. The … health and diversity, which can in turn boost yields for both food and for candidate bioenergy feedstock crops. …

… … DAN: Welcome back for episode 9 of Natural Prodcast. This week, Alison and I … he’s been leading an effort to build The Natural Product Atlas , or NPAtlas, a freely accessible natural products … transcriptomics, metabolomics, and natural products in plants, fungi, and microorganisms. If you want to …

… of energy and nutrient exchange, as well as microbial and plant responses to environmental changes. With advanced mass … biogeochemical processes, development of high performance plants and microbes, and understanding microbiome …

… and collaborators have the right to produce manuscripts for publication and the responsibility for leading the efforts to do so, and JGI expects … of the paper. Auspice Statements Including appropriate tracking numbers is critical to facilitating the tracking of …

… have you applied them? Dan Udwary: Well, at JGI we have the Atlas of Biosynthetic Clusters . And this is a very raw … called “disease suppression”, where the microbiome of a plant, so the bacteria living on and inside the roots are protecting the plants against pathogens. So …

… and ergot alkaloids come from fungi, and Taxol from plants. Plants, fungi, bacteria, archaea, they all have … so secondary metabolism is throughout nature, except maybe for animals and humans, not as much. You know, we have this … Frankia . And so the Frankia are bacteria that live in the root nodules of plants. And these guys were sequenced, and …