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The User Support Analysis group provides computational analysis for new technology development and JGI user science … for diverse experiment types, with main focus areas being genome variation, transcriptomics and epigenomics. Our work …

… “Adopt a Genome” is an informal program for faculty to “claim” the JGI’s unpublished microbial genomes, with the expectation that faculty will work with undergraduates in the analysis and publication of the claimed genome sequences. …

UDWARY: You’re listening to the Department of Energy Joint Genome Institute’s Natural Prodcast, a podcast about natural … a slacker. We’ve had all kinds of chaos here between the pandemic. I had an international move. You had an interstate … would have really done a somewhat exhaustive chemical analysis of a bacterium that they’re interested in, usually …

The Metagenome Program uses advanced sequencing technologies to … tools and visualization resources that support user analysis of biogeochemically-relevant pathways, enabling … metagenomics and targeted gene searches to expand representation of uncultivated microbial lineages. …

… focuses on using cutting-edge sequencing, annotation and analysis techniques to explore the vast and diverse world of … driven prioritization lists for laboratory isolation and genome sequencing of underexplored bacterial and archaeal … that are important for bioeconomy applications. By expanding our knowledge of microbial functions and …

… workflow, and is responsible for the annotation and analysis of (meta)genomic, (meta)transcriptomic, and … data and serving them to users via the Integrated Microbial Genomes & Microbiomes (IMG/M) system. Research Team    … The … to ascertain mis-assignment of species names in genomes spanning nearly 18% of all existing species. Additionally, …

… cycle times from sample receipt to completion of standard analysis.  Raw data is provided for all sequencing products … Fungal Minimal Draft Lower coverage short-read whole genome shotgun sequencing Assembly, annotation ( Mycocosm ) 256/404 Fungal Standard Draft Whole genome shotgun sequencing using long-read sequencing. Exact …

Udwary: You’re listening to the Department of Energy Joint Genome Institute’s Natural Prodcast, a podcast about natural … and a lot of the really important recent events in data analysis and secondary metabolism over the last decade or … be her room now but, well, it became my office due to the pandemic. And she’s sleeping in our bedroom together with us …

… this identification, metabolomics enables functional genome annotation, improves understanding of the role small … based methods in combination with advanced computational analysis.   Overview of metabolomics products At JGI, … your results as well as our library standards. … Metabolite Analysis & Metabolomics Instrumentation … Metabolite …

… tripartite plant-bacterial-phage model system. We seek to expand beyond this model system by identifying phages and … construct a bioenergy plant single-cell atlas comprising Sorghum, Switchgrass, and Brachypodium datasets. We recently …

… ‘omics capabilities to enhance understanding of gene and genome function, particularly those not readily achievable … accepted proposals, sequencing, synthesis, metabolomics and analysis will be paid for by the Department of Energy’s …

… the DOE's vision for a sustainable, bio-based economy. … Genome to Enzymes and Pathways focuses on discovering and … IMG/M system serves as a community resource for comparative analysis and annotation of all publicly available genomes … as well as insights into clade-specific novelties and expansions.  … ICE is an open source registry platform …