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The JGI’s Microbial Program focuses on using cutting-edge sequencing, annotation and analysis … single-cell sequencing, resequencing, RNA sequencing and epigenomics. Expansion of sequence space:  The JGI generates …

The IMG group owns and maintains integral components of JGI’s production workflow, and is responsible for … genomic data and serving them to users via the Integrated Microbial Genomes & Microbiomes (IMG/M) system. Research Team    … The Integrated Microbial Genomes group is focused on:  Developing …

… genetic elements. Beyond exploring and characterizing microbial diversity, work in the Metagenome Program uses … metagenomic data with detailed characterization of model systems to explore the dynamics of microbial … such as quantitative stable isotope probing (qSIP)-metagenomics and metatranscriptomics, to metagenomics and …

Research in the Eloe-Fadrosh group focuses on using genome-resolved metagenomic approaches to identify … of metagenomes for signatures of viruses and novel microbial lineages, and reconstruct metabolic properties … communities and ecosystem function.  The Environmental Genomics group also hosts the Viral Genomics group . …

… program for faculty to “claim” the JGI’s unpublished microbial genomes, with the expectation that faculty will work with undergraduates in the … with some of the latest developments in microbial genomics, metagenomics, and computational biology, and to …

… development of complex biomolecules — which can include antimicrobial and anti-pest compounds.  The program is working … learning algorithms for gene annotation and protein folding models, to improve the accuracy of functional predictions … on Phytozome … Phytozome is the JGI's Plant Comparative Genomics portal. Families of related genes representing the …

… about natural products and the science and scientists of secondary metabolism. Welcome back for our second season of … streams. This will all become clearer as we get into the genomics. So– ALISON TAKEMURA: I’m just enjoying the ride … of the IMG data portal , which is a larger portal for microbial genomics. IMG stands for Integrated Microbial …

… including fungal and bacterial symbionts, detrimental microbial pathogens, and associated viruses that all … are influenced by microbial partners. We use a variety of genomics-powered tools to study this complexity, including … phage function in this tripartite plant-bacterial-phage model system. We seek to expand beyond this model system by …

I think the important thing to remember is that, thanks to genomics, we now know that it is very hard to find stuff … UGA-Langebio in Irapuato, Mexico. His interests are in microbial diversity and evolution, particularly as how … URI. “ The evolution of secondary metabolism – a unifying model” “ Natural products – a simple model to explain …

… in 1985, which highlights our skewed understanding of microbial metabolism towards a minority of cultivated … of uncultivated lineages is of high value to establish models and hypotheses, experimental data is critical to … focused on the application of  function-driven single-cell genomics . Here, single cells are characterized and selected …

Microbes drive critical ecosystem functions and affect global nutrient cycling, however they do so … constraints exerted by viruses. Research in the viral genomics group aims at improving our collective … parameters driving virus:host dynamics in environmental microbial communities. This involves both experimental and …

… for Biotechnology . We are located in the Integrative Genomics Building in the heart of the Berkeley Lab campus, … went on to advance basic science by sequencing scores of microbial species as well as several model organisms and contributing this information freely to …