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… of next-generation biofuels by studying perennial grasses and fast-growing trees as renewable energy … improve the accuracy of functional predictions and speed up genome analysis. Additionally, the Plant Program is … Pangenomes , driven by DOE science needs, this program is expanding JGI Plant Flagship genomes into pangenomes, which …

… The Metagenome Program uses advanced sequencing technologies to decode the genomes of microbes in their natural environments. This work … and characterizing microbial diversity, work in the Metagenome Program uses several experimental approaches to … The Metagenome Program focuses on the high-throughput sequencing of …

… Research in the Eloe-Fadrosh group focuses on using genome-resolved metagenomic approaches to identify and … computational approaches to sift through thousands of metagenomes for signatures of viruses and novel microbial … and reconstruct metabolic properties encoded within those genomes. Our aim is to more fully capture microbial and …

… analyses and metabolomics. At the same time, the team is expanding current capabilities in strain engineering and …

… Programs and Operations teams to enable the JGI’s focus on expanding molecular capabilities and functional genomics, … profiling transcription factor binding sites across entire genomes. This technology has been further scaled to a … DNA amplification, and sequence analysis to recover the genomes of uncultivated microbes. We also apply labeling …

… UDWARY: You’re listening to the Department of Energy Joint Genome Institute’s Natural Prodcast, a podcast about natural … favorite topic in, arguably, my area of expertise, which is genome mining. You’ll hear us talk about what it is, hear me … JGI paper that’s just come out where I got the chance to do genome mining on more than 50,000 genomes that we derived …

… NOTICE The Data Portal application has replaced the JGI Genome Portal . Book a session via the appointment calendar … Download plant, algal, fungal and microbial genomes and metagenomes — top-quality genomic data, open to all researchers. … for comprehensive access to information regarding genome and metagenome sequencing projects, and their …

… biochemical diversity within secondary metabolites, expanding their potential applications in the bioeconomy … function of these biologically significant compounds. By expanding the repertoire of secondary metabolites and … factors and determine their binding sites across multiple genomes. Computational prediction of heterologous …

… driven prioritization lists for laboratory isolation and genome sequencing of underexplored bacterial and archaeal … lineages that are important for bioeconomy applications. By expanding our knowledge of microbial functions and … catalog : Beyond minimal draft and improved draft microbial genomes the program offers single-cell sequencing, …

… Genome to Enzymes and Pathways focuses on discovering and … vital to DOE missions. Using bioinformatics tools and genome portals, we study lignocellulose decomposition, CO2 … analysis and annotation of all publicly available genomes from three domains of life, in a uniquely integrated …

… Udwary: You’re listening to the Department of Energy Joint Genome Institute’s Natural Prodcast, a podcast about natural … will be episode 11. This continues our little sprint on genome mining. In the last episode , Alison and I talked about the basics of genome mining, which is using DNA sequence to identify and …

… “Adopt a Genome” is an informal program for faculty to “claim” the JGI’s unpublished microbial genomes, with the expectation that faculty will work with … in the analysis and publication of the claimed genome sequences. This opportunity, provided by the Joint …