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Metagenome Program
The Metagenome Program uses advanced sequencing technologies to … Program is to develop a deeper understanding of microbial community assembly and microbial interactions, including … focuses on developing computational tools and visualization resources that support user analysis of …
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Community Science Program
The Community Science Program (CSP) provides the scientific community at large with access to high-throughput … Areas . Through this program, the DOE aims to advance genome science-based scientific research from a broad range …
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JGI Portals
… platforms are a key resource for the broader scientific community and require constant developments to meet the … of our users. … Download plant, algal, fungal and microbial genomes and metagenomes — top-quality genomic data, open to … and analytical tools for all JGI sequencing projects. In 2021, the JGI launched the Data Portal to eventually replace …
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Microbial Program
… driven prioritization lists for laboratory isolation and genome sequencing of underexplored bacterial and archaeal … from environmental samples.  … The IMG/M system serves as a community resource for comparative analysis and annotation of all …
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Plant Program
… compounds.  The program is working to expand genomic resources for key plant species, enhancing our understanding … improve the accuracy of functional predictions and speed up genome analysis. Additionally, the Plant Program is … and function. These species are carefully selected by the community to evenly sample the diversity of the plant …
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Natural Prodcast Episode 10: A Primer on Genome Mining
UDWARY: You’re listening to the Department of Energy Joint Genome Institute’s Natural Prodcast, a podcast about natural … found in Yu et al, APPLIED AND ENVIRONMENTAL MICROBIOLOGY, 2004, 1253–1262, 70:3 ALISON TAKEMURA: And so did you … everybody uses, is called antiSMASH . And it is another community effort that’s been built up over the years and is …
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DNA Synthesis Program
… has been a pioneering effort in functional genomics since 2012, with a focus on addressing critical energy and … the DOE's vision for a sustainable, bio-based economy. … Genome to Enzymes and Pathways focuses on discovering and … engineering workflows. … The IMG/M system serves as a community resource for comparative analysis and annotation …
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Fungal & Algal Program
… and bioproducts. By sequencing and analyzing the genomes of these organisms, the program investigates the … solutions, fostering a bioeconomy powered by nature’s resources. … The Fungal & Algal Program harnesses … comparative and genome-centric analyses of fungi and community annotation. … Phycocosm is a comprehensive …
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Mission
Biological and Environmental Research program, the Joint Genome Institute provides advanced genomic capabilities, … and professional expertise to support the global research community in studies of complex biological and environmental … this information freely to the public databases. In 2004, the JGI established itself as a national user …
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Natural Prodcast Episode 11: Marnix Medema
Udwary: You’re listening to the Department of Energy Joint Genome Institute’s Natural Prodcast, a podcast about natural … to tell a quick story. Looking back, the year was probably 2010, 2011, I was a, uh- actually, I’ve got the t-shirt on … Tilmann on this. But this also has become very open to the community as well, so the versions of antiSMASH that we …
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The genome of Eucalyptus grandis
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CSP Functional Genomics
… ‘omics capabilities to enhance understanding of gene and genome function, particularly those not readily achievable … mission relevance , proposed data usage by the applicant/community, and track record of the applicant.  Learn about … any questions prior to proposal submission.   … Additional Resources …
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