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… owns and maintains integral components of JGI’s production workflow, and is responsible for the annotation and analysis … genomic data and serving them to users via the Integrated Microbial Genomes & Microbiomes (IMG/M) system. Research … within IMG. While ANI is integrated within IMG, ani.jgi.doe.gov serves the current data. … The mission of the …

FY 2025 DOE Metrics Sequencing Quarter Total Bases (Trillions) … days due to reduced lab activities related to the return-to-work plan in response to the pandemic.   FY 2019 Number of … Q1 – Report on new computational developments for improving microbial, metagenomic, or plant genome assemblies. …

The JGI’s Microbial Program focuses on using cutting-edge sequencing, … and microbial diversity. Learn more about this work and further details on our Genomic Encyclopedia of … directly isolated from environmental samples.  … The IMG/M system serves as a community resource for comparative …

… approved proposal starts with a User Agreement — before any work can begin, including the submission of samples for sequencing, or the submission of … data for synthesis. This agreement, required by the DOE for all work performed in its User Facilities, is a …

… program for faculty to “claim” the JGI’s unpublished microbial genomes, with the expectation that faculty will work with undergraduates in the analysis and publication of … biological insights from sequence data, employing IMG data and tools for comparative analysis, visualization …

I’ll introduce my new co-host, who I’m really excited to be working with, and I think you all will be too. But, today, I … what are you going to do. So, you probably know that “DOE” is the United States Department of Energy, which is a … the user programs at the JGI, and I’m also the head of the microbial genome program. And I’m a scientist here. And have …

The JGI’s Metabolomics Program works to uncover the roles of small molecules in biological … exploration of energy and nutrient exchange, as well as microbial and plant responses to environmental changes. With … in living systems, particularly as they relate to DOE missions in the bioeconomy, sustainability, and …

… to request the capabilities and expertise of multiple DOE National User Facilities in one research proposal.  … who consider technical feasibility and readiness to begin work. During scientific peer review, proposals are evaluated … samples of the spatial, temporal, taxonomic (environmental, microbial, plants, invertebrate, and vertebrate), and …

… about Antarctica, and we want to talk about molecular networking, because I really enjoyed the review that you wrote … has been really, really fun. Alison Takemura: And then does that also– well, I guess the question really is, do … And sometimes, in terms of biological activities– like antimicrobial or something– sometimes a little difference is …

… the genomes of microbes in their natural environments. This work encompasses bacteria, archaea, and micro-eukaryoes, … genetic elements. Beyond exploring and characterizing microbial diversity, work in the Metagenome Program uses … computational tools for analyzing viral fragments via IMG/VR and methods to capture  environmental viral …

… number of activities to facilitate world-class science. PMO works with users, JGI scientists and technical staff to … or the submission of sequencing data for synthesis – the DOE requires that all work performed in its User Facilities … Tijana Glavina del Rio Metagenomics         Danielle Graham Microbial Program Nancy Hammon Workflow Planning Manager …