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… to unravel functional capabilities of plants, microbes and microbial communities, global carbon and nutrient cycling, … is no cost to the user and no granting of funds. … For the CSP Large Scale call, a Letter of Intent (LOI) is required … by the due date printed below. Proposals will be invited from those applicants whose LOI is approved. The letter of …

… interview with my co-host Alison Takemura, who’s moved on from JGI to do real journalism, and we wish her all the … going to talk about JGI’s Community Science Program , or CSP, which is the main mechanism by which users work with … the user programs at the JGI, and I’m also the head of the microbial genome program. And I’m a scientist here. And have …

The JGI’s Microbial Program focuses on using cutting-edge sequencing, … catalog : Beyond minimal draft and improved draft microbial genomes the program offers single-cell sequencing, … of sequence space:  The JGI generates reference genomes from diverse bacterial and archaeal lineages to improve …

The CSP Functional Genomics call is to enable users to perform state-of-the-art functional genomics research and …

… program for faculty to “claim” the JGI’s unpublished microbial genomes, with the expectation that faculty will work with … … A primary purpose of this project is to bring educators from a broad range of disciplines up-to-speed with some of …

The CSP New Investigator Call is for investigators and research initiatives new … PIs cannot have been lead PI on any previously accepted JGI CSP or FICUS proposal.   Competitive projects will provide …

… genomic data and serving them to users via the Integrated Microbial Genomes & Microbiomes (IMG/M) system. Research Team    … The … species specificity of single cells and genomes extracted from metagenomes, and also as a metric for quality control …

… approaches to identify and characterize genomic information from uncultivated microbes and viruses. We develop … of metagenomes for signatures of viruses and novel microbial lineages, and reconstruct metabolic properties … Catalog of Earth’s Microbiomes .  Nature Biotechnology . 2020 Nov 9. Vyshenska, Dariia et al. (2023)  A standardized …

… genetic elements. Beyond exploring and characterizing microbial diversity, work in the Metagenome Program uses … enabling modeling of microbiomes based on functional traits. These advancements provide new insights into … regulation, and noncoding RNAs in microbiomes. The insights from this work have the potential to drive innovations in …

Large-Scale Call, as well as successful submissions to our CSP New Investigator, CSP Functional Genomics, and … calls. These documents have been shared with permission from the PIs who drafted them.  … Elucidating Sphagnum … genetic microdiversity or core metabolic flexibility? … Microbial contributions to soil carbon storage during …

… industry engagement through three primary routes:  … The CSP provides the scientific community at large with access … improving sustainable soil management practices. … In June 2020, the Department of Energy announced the  2020 TCF … strain for the production of biofuels and bioproducts from low-cost gas feedstock. For more information about the …

… target is based on 98% of the total available hours.   FY 2020 DOE Metrics There were 2,038 unique* JGI users in … Q1 – Report on new computational developments for improving microbial, metagenomic, or plant genome assemblies. … Hours reflect a delay in implementation of the LIMS from Q2 to Q3. As a result of the delay in the LIMS …