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… going to talk about JGI’s Community Science Program , or CSP, which is the main mechanism by which users work with … info about the CSP, FICUS, New Investigator and Functional Genomics calls. For my audience, all of these programs can and often do involve secondary metabolism. JGI’s mission is broadly focused on biological …

The CSP Functional Genomics call is to enable users to perform state-of-the-art functional genomics research and to help them translate genomic information into biological function.  The emphasis …

The Community Science Program Large Scale Call is focused on genomic science projects that address sustainable biofuel … is no cost to the user and no granting of funds. … For the CSP Large Scale call, a Letter of Intent (LOI) is required …

The CSP New Investigator Call is for investigators and research … PIs cannot have been lead PI on any previously accepted JGI CSP or FICUS proposal.   Competitive projects will provide … a novel approach or form the foundation for a large-scale CSP proposal submission. Sequence requests should not exceed …

Large-Scale Call, as well as successful submissions to our CSP New Investigator, CSP Functional Genomics, and Facilities Integrating Collaborations for User …

The program provides high-quality, large-scale genomic data to advance microbial research that drives … management. The program aims to generate high-quality genomic datasets, particularly for uncultivated … cell approaches. This includes linking strain-level genetic variation to ecological niche adaptations.  Single cell …

… streams. This will all become clearer as we get into the genomics. So– ALISON TAKEMURA: I’m just enjoying the ride … there was a biosynthetic gene cluster there. But that’s one family of biosynthetic genes. And so, I think antiSMASH– oh, … Catalog of Earth’s Microbiomes. Nature  Biotechnology . 2020 Nov 9. doi: 10.1038/s41587-020-0718-6) The GEM catalog …

… target is based on 98% of the total available hours.   FY 2020 DOE Metrics There were 2,038 unique* JGI users in FY2020 , which includes Principal Investigators (PIs), Co-PIs, … new computational developments for improving microbial, metagenomic, or plant genome assemblies. [Download PDF] Q2 – …

… industry engagement through three primary routes:  … The CSP provides the scientific community at large with access … improving sustainable soil management practices. … In June 2020, the Department of Energy announced the  2020 TCF … genome engineering (CRAGE), which offers single-step genomic integration and prototyping of complex pathways. The …

… the Eloe-Fadrosh group focuses on using genome-resolved metagenomic approaches to identify and characterize genomic … Catalog of Earth’s Microbiomes .  Nature Biotechnology . 2020 Nov 9. Vyshenska, Dariia et al. (2023)  A standardized … Catalog of Earth’s Microbiomes .  Nature Biotechnology . 2020 Nov 9. doi: 10.1038/s41587-020-0718-6. Ladau, J. et al. …

… to the user and no granting of funds.   Proposal Call FICUS CSP Large Scale CSP New Investigator CSP Functional Genomics Status CLOSED CLOSED ONGOING ONGOING Who Should …

… products and the science and scientists of secondary metabolism. Hey there, and welcome back to Natural Prodcast, … nicer than MIBiGC or MIBIC. Dan Udwary: Yeah. And the big family continues. So next I think was BiG-SCAPE and now … of hooks into IMG’s data. IMG being Integrated Microbial Genomics at JGI, a large data set of bacterial genomes. And …