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… going to talk about JGI’s Community Science Program , or CSP, which is the main mechanism by which users work with … the user programs at the JGI, and I’m also the head of the microbial genome program. And I’m a scientist here. And have … are marine related, and so we can do some projects that are freshwater and coastal. But we’ve kind of shied away from …

… For the CSP Large Scale call, a Letter of Intent (LOI) is required … must clearly demonstrate relevance and translatability to freshwater, coastal, or terrestrial systems. …

… The CSP New Investigator Call is for investigators and research … PIs cannot have been lead PI on any previously accepted JGI CSP or FICUS proposal.   Competitive projects will provide … a novel approach or form the foundation for a large-scale CSP proposal submission. Sequence requests should not exceed …

… The CSP Functional Genomics call is to enable users to perform …

… The JGI’s Microbial Program focuses on using cutting-edge sequencing, … provides high-quality, large-scale genomic data to advance microbial research that drives sustainable solutions in … The Microbial Program focuses on using advanced sequencing technologies to explore microbial diversity — with an emphasis on bacteria and …

… (Nature Communications 2017, Science 2018, Molecular Cell 2019) and massive reconstruction of genomes from uncultivated microbes (Nature 2019). Other projects in the group include the sequencing … metagenomics. Nature 578(7795):432-436 Sberro H, et al. (2019) Large-Scale Analyses of Human Microbiomes Reveal …

… the return-to-work plan in response to the pandemic.   FY 2019 Number of Unique Users There were 1,933 unique* JGI users in FY2019 , which includes Principal Investigators (PIs), Co-PIs, … Q1 – Report on new computational developments for improving microbial, metagenomic, or plant genome assemblies. …

… of metagenomes for signatures of viruses and novel microbial lineages, and reconstruct metabolic properties … within those genomes. Our aim is to more fully capture microbial and viral diversity, leading to a better understanding of microbial communities and ecosystem function.  The …

… program for faculty to “claim” the JGI’s unpublished microbial genomes, with the expectation that faculty will … by the Joint Genome Institute, builds upon thousands of microbial genomes that have been sequenced by the JGI though … up-to-speed with some of the latest developments in microbial genomics, metagenomics, and computational biology, …

… Large-Scale Call, as well as successful submissions to our CSP New Investigator, CSP Functional Genomics, and Facilities Integrating … Microbial contributions to soil carbon storage during … CSP Large Scale Proposal #1 … CSP Large-Scale LOI #1 … CSP Large-Scale LOI #2 …

… to predict or just understand better the language of microbial cell-cell communication. And he told us about his … that grow on one-carbon compounds like methanol and methane. And I really dove into microbial physiology and microbial genetics, and really away …

… in 1985, which highlights our skewed understanding of microbial metabolism towards a minority of cultivated … Woyke T ., Doud D. F. R., Schulz F. The trajectory of microbial single-cell sequencing. Nat Methods 14(11): … T . Insights into the phylogeny and coding potential of microbial dark matter. Nature 499, 431-7 (2013). Hess M., …