Search

… going to talk about JGI’s Community Science Program , or CSP, which is the main mechanism by which users work with … for you or thousands metagenomes. And I think also the quality that we provide. So for fungal and for a lot of our … many microbes. We still we work in plates, right? We’re a high throughput sequencing. We have high throughput …

The CSP Functional Genomics call is to enable users to perform … ‘omics capabilities to enhance understanding of gene and genome function, particularly those not readily achievable … delay processing, while samples that are of insufficient quality or quantity will preclude approval for processing. … …

The CSP New Investigator Call is for investigators and research … PIs cannot have been lead PI on any previously accepted JGI CSP or FICUS proposal.   Competitive projects will provide … delay processing, while samples that are of insufficient quality or quantity will preclude approval for processing. … …

… is no cost to the user and no granting of funds. … For the CSP Large Scale call, a Letter of Intent (LOI) is required … delay processing, while samples that are of insufficient quality or quantity will preclude approval for processing. … …

… target is based on 98% of the total available hours.   FY 2018 DOE Metrics There were 1,882 unique* JGI users in FY2018 , which includes Principal Investigators (PIs), Co-PIs, … developments for improving microbial, metagenomic, or plant genome assemblies. [Download PDF] Q2 – Report on progress …

Large-Scale Call, as well as successful submissions to our CSP New Investigator, CSP Functional Genomics, and Facilities Integrating … … Characterization of simplified soil communities with high and low carbon use efficiency across differing moisture …

… 2014), unearthing hundreds of thousands of new viral genomes and their predicted hosts (Nature 2016, Science 2017, Nature Microbiology 2018), discovery of new genes with important … 6(7):960-970. Nayfach S, et al. (2021) CheckV assesses the quality and completeness of metagenome-assembled viral …

… and the JGI user community below for DNA preparation tools, high molecular-weight DNA extraction and RNA preparation.  … can be found here . DNA Extraction Protocols: … Tips for High Molecular Weight DNA extraction: … RNA Extraction …

… first described by Stanley and Konopa in 1985, which highlights our skewed understanding of microbial metabolism … in the strongly biased representation of sequenced genomes in the public domain, the bulk of which belong to … the Hungate1000 Collection.” Nat Biotechnol 36(4): 359-367 (2018). Woyke T ., Doud D. F. R., Schulz F. The trajectory of …

… in. All proposals must be written in English. … The CSP and FICUS calls are open to both domestic and … on our YouTube channel as well as in this episode of our Genome Insider podcast.  You can also contact … for sequencing projects can be found here . The quality of the starting material is one of the greatest …

… and microbiology just followed me all the way through my high school days in England.  DAN: What did your dad do in … a lot of sequencing capacity. And if people can get us good quality DNA, we can whip them through pretty quick.  DAN: So … NIGEL MOUNCEY: Yeah, so we put out a strategic plan in 2018. And in building that plan, we thought about secondary …

… strategy, operations, and scientific relevance and quality. Responsibilities of this board include providing … at the JGI; and overview of the Community Science Program (CSP). A crucial job of the committee is to take the input from the CSP Proposal Study Panel on prioritization of CSP projects …