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… going to talk about JGI’s Community Science Program , or CSP, which is the main mechanism by which users work with … today. Mostly, I think it all comes to explaining what a CSP is, how you apply for and get one, and what happens once … for you, we sequenced thousands for you or thousands metagenomes. And I think also the quality that we provide. So …

… The CSP Functional Genomics call is to enable users to perform …

… The CSP New Investigator Call is for investigators and research initiatives new to the JGI. Projects must be independent of … PIs cannot have been lead PI on any previously accepted JGI CSP or FICUS proposal.   Competitive projects will provide …

… and should generally conform to the guidelines for our  CSP Large Scale call .  Process Proposals may be submitted … ethanol and other biofuels, advancing the federal initiative that seeks to reduce U.S. gasoline consumption by …

… For the CSP Large Scale call, a Letter of Intent (LOI) is required …

… Plant Flagship Genomes are selected through discussion with the JGI Plant … validated datasets to further gene function research. The  Open Green Genomes (OGG) project seeks to develop comparative … of interest and gene copy number variation across multiple genomes. It provides the ability to discover syntenic …

… target is based on 98% of the total available hours.   FY 2018 DOE Metrics There were 1,882 unique* JGI users in FY2018 , which includes Principal Investigators (PIs), Co-PIs, … the interpretation of microbial, metagenomic, or plant genomes. [Download PDF] End-of-year Goal – Develop one new …

… to the following Data Policy. It is our mission to support open data and information sharing. We also recognize the … FY22 and later through the Community Science Program (CSP), Facilities Integrating Collaborations for User Science (FICUS) initiative, Director’s Science (DS), Biological and …

… I got the chance to do genome mining on more than 50,000 genomes that we derived from meta-genome sequences. As … lab . And I hope we get Craig on here at some point. I’ve opened the door for him, and he’s a busy man. But he was … versions specialized for fungal BGCs and for plants . As an open source project, you can also download the code and run …

… 2014), unearthing hundreds of thousands of new viral genomes and their predicted hosts (Nature 2016, Science 2017, Nature Microbiology 2018), discovery of new genes with important … new CRISPR-Cas types) (Nature Communications 2017, Science 2018, Molecular Cell 2019) and massive reconstruction of …

… analysis and annotation of all publicly available genomes from three domains of life, in a uniquely integrated … Mycocosm enables users to navigate across sequenced fungal genomes, and to conduct comparative and genome-centric … ICE is an open source registry platform developed by the Joint …

… computational approaches to sift through thousands of metagenomes for signatures of viruses and novel microbial … and reconstruct metabolic properties encoded within those genomes. Our aim is to more fully capture microbial and … on the assembly of metagenomic sequence data into microbial genomes, which is of fundamental value to improving our …