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Natural Prodcast Episode 10: A Primer on Genome Mining
UDWARY: You’re listening to the Department of Energy Joint Genome Institute’s Natural Prodcast, a podcast about natural products and the science and scientists of secondary metabolism. Welcome back for our second season of … more than 50,000 genomes that we derived from meta-genome sequences. As always, you’ll find transcripts and show notes …
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Sequencing Submission Requirements for DNA Synthesis
When submitting sequences to the JGI DNA Synthesis program, please include the following items: … Sequence files for all constructs should be emailed to  Miranda Harmon-Smith, Synthetic Biology Project Manager . … How To …
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Natural Prodcast Episode 14: Nigel Mouncey
… … DAN: Hello, everyone, and Welcome back for Episode 14 of Natural Prodcast . … off today with my interview with the Director of the Joint Genome Institute and head of the Secondary Metabolites … normally run into or interact with in the course of your daily work.  DAN: Sure.  NIGEL MOUNCEY: I think an …
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Partnerships: Adopt-A-Genome
… “Adopt a Genome” is an informal program for faculty to “claim” the JGI’s unpublished microbial genomes, with the expectation that faculty will work with undergraduates in the analysis and publication of the claimed genome sequences. This opportunity, provided by the Department of …
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Metagenome Program
The Metagenome Program uses advanced sequencing technologies to decode the genomes of microbes in their natural environments. This work encompasses bacteria, archaea, and … comprising the largest public collection of plasmid sequences identified from genomes, SAGs, MAGs, metagenomes …
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Sequencing Technologies
… molecular capabilities and state-of-the-art next-generation sequencing to enable biological discovery by the JGI and … They apply Lean Six Sigma practices to process optimization and development approaches, testing various platforms to see what works best for applications. The team works hand in hand with the Project Management …
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DNA Synthesis Program
… of biofuels, biochemicals and other bioenergy solutions.  The program has been a pioneering effort in functional … the DOE's vision for a sustainable, bio-based economy. … Genome to Enzymes and Pathways focuses on discovering and … vital to DOE missions. Using bioinformatics tools and genome portals, we study lignocellulose decomposition, CO2 …
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Microbial Program
The JGI’s Microbial Program focuses on using cutting-edge sequencing, annotation and analysis … driven prioritization lists for laboratory isolation and genome sequencing of underexplored bacterial and archaeal … catalog : Beyond minimal draft and improved draft microbial genomes the program offers single-cell sequencing, …
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Natural Prodcast Episode 12: Nadine Ziemert
UDWARY: You’re listening to the Department of Energy Joint Genome Institute’s Natural Prodcast, a podcast about natural products and the science and scientists of secondary metabolism. Welcome back. This will be episode 12 of … Europe. So if there are any kind of dated references to the news, that’s why. But it was a really fun conversation. And …
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Products
… in: DNA and RNA sequencing, Sample and library preparation, DNA synthesis and pathway engineering Mass spectrometry … Fungal Minimal Draft Lower coverage short-read whole genome shotgun sequencing Assembly, annotation ( Mycocosm ) 256/404 Fungal Standard Draft Whole genome shotgun sequencing using long-read sequencing. Exact …
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Natural Prodcast Episode 7: Ben Shen
… … DAN: You’re listening to the US Department of Energy Joint Genome Institute’s “Natural Prodcast,” a podcast about the science and scientists of secondary metabolism.  DAN: Hello, and welcome back for Episode … And in DNA is all that the same molecule, just different sequences BEN: The other thing I think about JGI is, really, …
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JGI Portals
… resource for the broader scientific community and require constant developments to meet the ever-changing demands of our users. … Download plant, algal, fungal and microbial genomes and metagenomes — top-quality genomic data, open to all researchers. …
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