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Plant Program
… challenges by exploring plants’ role in capturing carbon, detoxifying soils, interacting with other organisms, and adapting to environmental changes. The program lays the groundwork for sustainable solutions to current problems facing … improve the accuracy of functional predictions and speed up genome analysis. Additionally, the Plant Program is …
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Institutional User Agreements
… approved proposal starts with a User Agreement — before any work can begin, including the submission of samples for sequencing, or the submission of … for synthesis. This agreement, required by the DOE for all work performed in its User Facilities, is a legally binding …
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Natural Prodcast Episode 10: A Primer on Genome Mining
… UDWARY: You’re listening to the Department of Energy Joint Genome Institute’s Natural Prodcast, a podcast about natural products and the science and scientists of secondary metabolism. Welcome back for our second season of … here at the Joint Genome Institute, because we don’t work on human health or on medicines per se, how do you see …
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Project Management Office
… number of activities to facilitate world-class science. PMO works with users, JGI scientists and technical staff to onboard users and guide them through the process of working with our facility. This includes help with: … Please review our FAQ in advance of contacting the PMO office.  …
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Metagenome Program
… The Metagenome Program uses advanced sequencing technologies to decode the genomes of microbes in their natural environments. This work encompasses bacteria, archaea, and micro-eukaryoes, … The Metagenome Program focuses on the high-throughput sequencing of … tools for user analysis. Additionally, the Program works to link community-scale microbial activity …
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Environmental Genomics Group
… Research in the Eloe-Fadrosh group focuses on using genome-resolved metagenomic approaches to identify … computational approaches to sift through thousands of metagenomes for signatures of viruses and novel microbial … on the assembly of metagenomic sequence data into microbial genomes, which is of fundamental value to improving our …
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Partnerships: Adopt-A-Genome
… “Adopt a Genome” is an informal program for faculty to “claim” the JGI’s unpublished microbial genomes, with the expectation that faculty will work with undergraduates in the analysis and publication of … in microbial genomics, metagenomics, and computational biology, and to empower them with the knowledge and …
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The More the Merrier: Making the Case for Plant Pan-genomes
… Brachypodium model system traces polyploid genome evolution. Flowering plants abide by the concept, … of the genomes from the diploids  B. stacei and  B. distachyon , a relative of the candidate bioenergy crop … The U.S. Department of Energy Joint Genome Institute, a DOE Office of Science User Facility …
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Who We Are
…   The U.S. Department of Energy (DOE) Joint Genome Institute (JGI) is a national user facility located at Lawrence Berkeley National Laboratory. The JGI consists of 225 researchers and … The U.S. Department of Energy (DOE) Joint Genome Institute (JGI) is a high-throughput AI-centric …
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Genome Insider
… The Genome Insider podcast brings listeners into the science … interviews researchers — JGI Users — and dives into their work on all kinds of organisms, from plants and fungi to microbes …
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Industry Engagement Program
… As a National User Facility, the JGI serves more than 2,500 users … accessible, AI-ready large-scale data repositories for genome information with analysis tools for mining and prediction The JGI works in partnership with Berkeley Lab’s Strategic … with defined deadlines and straightforward submission steps.  …
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