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… “Adopt a Genome” is an informal program for faculty to “claim” the JGI’s unpublished … Xenorhabdus japonica DSM16522 R Robertson, et. al.  2023 . Microbiology Resource Announcements. 2023 12 (10), e00548-23 Whole genome sequence …

…     2,167     *Includes Illumina and PacBio sequencing platforms. **Operating Hours target is based on 98% of the total … target is based on 98% of the total available hours.   FY 2023 DOE Metrics There were 2,373 unique* JGI users in FY2023 , which includes Principal Investigators (PIs), Co-PIs, …

… … DAN: Hey, everybody. Welcome back for another episode of Natural Prodcast. Right now I’m … absence of oxygen. But these are the next step in the food web. So these are organisms– if you think about maybe you’re … genes and an unusual acyl-homoserine lactone signal . mBio. 2023 Aug 31;14(4):e0101023. doi: 10.1128/mbio.01010-23. …

… the series of interviews we recorded at the Society for Industrial Microbiology and Biotechnology (SIMB) Natural … take this data. One that I’ll point out specifically is a website created by Nick Turner’s lab. So Nick Turner is at … Chemoenzymatic Tropolone Synthesis”, (preprint)  ChemRxiv.  2023.   doi: 10.26434/chemrxiv-2023-lvngd “Enabling Broader …

… analysis and interpretation is creating new opportunities for breakthrough discoveries and catalyzing a major … and visualization of big data. … Pavlopoulos GA et al. (2023) Unraveling the functional dark matter through global … Nature . 622(7983):594-602. Camargo AP. et al. (2023) Identification of mobile genetic elements with …

… approaches to identify and characterize genomic information from uncultivated microbes and viruses. We develop … approaches to sift through thousands of metagenomes for signatures of viruses and novel microbial lineages, and … Biotechnology . 2020 Nov 9. Vyshenska, Dariia et al. (2023)  A standardized quantitative analysis strategy for …

… genome miners use, including antiSMASH, MIBiG, and newer efforts, like BiG-scape and BiG-SLiCE, and now the BiG-FAM … biosynthetic gene cluster families. And he tells us about forthcoming efforts in paired-omics data sets and seeking to … still a collaboration, indeed, with my group. And Tilmann Weber ’s group, and in particular, Kai Blin and Simon Shaw …

Doering and Bryce Foster and too many others to name at JGI for the last two years or so. SMC is now released and ready … all of those have ended up in the SMC database. There’s a web front end for it, and it’s just a massive pile of data. … Metabolites Collaboratory SMC Workshop Materials from the 2023 JGI Annual Meeting Using the SMC Website API Endpoints …

… of the process needed to prepare and ship samples for sequencing by the JGI.  Additionally it includes … quantity and quality has been the rate-limiting step for many projects at the JGI. The quality of the starting … metadata is collected via spreadsheet or directly via a web interface prior to shipping samples to the JGI. PI sends …

… sequencing, synthesis, and targeted metabolomics support for DOE-BER funded awards, including awards funded through  BER Funding Opportunity Announcements ,  Science Focus Areas  (SFA) opportunities, … in the BER funding call, proposals are NOT eligible for BERSS support through the JGI (with the exception of …

…   Each year, the JGI accepts proposals for state-of-the-art functional genomics research from potential users who need help translating genomic information into biological function. Through our CSP … Below find a list of the six researchers accepted for 2023. Proposals are accepted year-round; the next deadline …