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… in natural environments. Integrating metatranscriptomes and metagenomes can, for instance, deepens our understanding of … of plasmid sequences identified from genomes, SAGs, MAGs, metagenomes and metatranscriptomes. … GOLD is a web resource …

… computational approaches to sift through thousands of metagenomes for signatures of viruses and novel microbial …

… specificity of single cells and genomes extracted from metagenomes, and also as a metric for quality control within …

… so far no species or no strains known that really grow in freshwater. But they’re actually pretty orange, and they … that easily can identify secondary metabolite pathways in metagenomes, which is still hard to do. We are mining a lot …

… must clearly demonstrate relevance and translatability to freshwater, coastal or terrestrial systems. Additional … such as heavy metals or radionuclides in soils, freshwater, coastal sediments (coastal here defined  by NOAA …

… must clearly demonstrate relevance and translatability to freshwater, coastal, or terrestrial systems. … All proposals …

… of plasmids automatically identified from genomes, metagenomes, and metatranscriptomes. It provides rich data … of Uncultivated Viral Genomes, derived from genomes, metagenomes, and metatranscriptomes, with over 15 million …

… for you, we sequenced thousands for you or thousands metagenomes. And I think also the quality that we provide. … gets analyzed. And in a way that helps the PI, I think. For metagenomes and microbial genomes, in part because of the … are marine related, and so we can do some projects that are freshwater and coastal. But we’ve kind of shied away from …

… set of MAGs to date. Here, at JGI, we took more than 10,000 metagenomes, many of which were sequenced at JGI, and some … TAKEMURA: –just give me a few examples of where these metagenomes came from? DAN UDWARY: Oh, yeah. These things …

… of that lake for over 20 years, to understand how the freshwater ecosystem works.  So a few years ago, when they set out to analyze 500 metagenomes, it was the biggest project the JGI had ever put …