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Viral Genomics Group
… Microbes drive critical ecosystem functions and affect global nutrient cycling, however they do so … strong constraints exerted by viruses. Research in the viral genomics group aims at improving our collective understanding of ecological and evolutionary parameters driving virus:host …
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Metagenome Program
… uses advanced sequencing technologies to decode the genomes of microbes in their natural environments. This work encompasses bacteria, archaea, and … research provides insights into microbial diversity and metabolic potential, with implications for energy … The Program also aims to build a global-scale catalog of viral, microbial, and microeukaryote genomes and mobile …
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Microbial Program
… The JGI’s Microbial Program focuses on using cutting-edge sequencing, annotation and analysis techniques to explore the vast and diverse world of microbes. Studying bacteria and archaea, including those … and bioeconomy applications. The program provides high-quality, large-scale genomic data to advance microbial …
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Environmental Genomics Group
… Research in the Eloe-Fadrosh group focuses on using genome-resolved metagenomic approaches to identify … of viruses and novel microbial lineages, and reconstruct metabolic properties encoded within those genomes. Our aim is to more fully capture microbial and viral diversity, leading to a better understanding of …
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Metabolomics Program
… The JGI’s Metabolomics Program works to uncover the roles of small molecules in biological systems, linking them with … metabolites, genes, and proteins. It also enables exploration of energy and nutrient exchange, as well as microbial and … terrestrial biogeochemical processes, development of high performance plants and microbes, and understanding …
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Publication Policy
… The purpose of this policy is to establish communication norms around … that the data produced by the facility result in scientific publications. JGI users and collaborators have the right to … JGI Staff: Upon request, JGI staff will provide Users with a list of …
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New Lineages of Life Group
… Our research is focused on the discovery and characterization of novel bacterial, archaeal and eukaryotic microbes and viruses in environmental sequence data. We use multi-omics … of giant viruses, which challenge our understanding of viral complexity and evolution Our research focuses on …
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Partnerships: Adopt-A-Genome
… the JGI’s unpublished microbial genomes, with the expectation that faculty will work with undergraduates in the analysis and publication of the claimed genome sequences. This opportunity, provided … in microbial genomics, metagenomics, and computational biology, and to empower them with the knowledge and …
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Fungal & Algal Program
… The Fungal & Algal Program explores the vast diversity of fungi and algae to unlock their potential for bioenergy, environmental sustainability, and bioproducts. By sequencing and … that enable fungi and algae to play a vital role in carbon cycling, biodegradation and biogeochemistry. This …
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Data Ecosystem
… The JGI is leveraging its current partnerships to offer new capabilities and … users through a BER data ecosystem.  A data ecosystem is a connected resource where data from different organizations is … specifically optimized for high-performance computing environments. …
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Plant Microbial Interactions Group
… are complex organisms that harbor a fantastic diversity of cell types and associated organisms, including fungal and bacterial symbionts, detrimental microbial pathogens, and associated viruses that all … whereby they can modulate host metabolism, gene expression and phenotype. We have recently identified resident …
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Secondary Metabolites Program
…   The JGI’s Secondary Metabolites Program focuses on the exploration of secondary metabolites across bacteria, fungi, algae and … growth, provide critical advantages to the organisms producing them, and are often involved in defense, nutrient … The Secondary Metabolites Program targets the vast and …
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