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… that the data produced by the facility result in scientific publications. JGI users and collaborators have the right to … is done in a timely fashion. The publications resulting from such efforts should specify the collaborative nature of … staff who contributed to their project, using the CRediT taxonomy ( credit.niso.org/ , with descriptions here ). This …

… of novel bacterial, archaeal and eukaryotic microbes and viruses in environmental sequence data. We use multi-omics … Exploring the fascinating world of giant viruses, which challenge our understanding of viral … research focuses on discovering and characterizing giant viruses, which possess genomes and particle sizes that rival …

… however they do so under strong constraints exerted by viruses. Research in the viral genomics group aims at … in virus:host interaction and host cell take-over by viruses, and attempts to evaluate ecosystem-level impacts of … of phage and virus genomes have been assembled and reported from metagenomes, our understanding of the impacts of these …

… faculty will work with undergraduates in the analysis and publication of the claimed genome sequences. This … talent for biosciences.  Adopt-a-Genome has: ~20 faculty from institutions across the country Efforts in ongoing … A primary purpose of this project is to bring educators from a broad range of disciplines up-to-speed with some of …

… approaches to identify and characterize genomic information from uncultivated microbes and viruses. We develop computational approaches to sift through thousands of metagenomes for signatures of viruses and novel microbial lineages, and reconstruct … potential applications. By recovering population genomes from metagenomes, we gain insights into microbial …

… we get to present our conversation with Marnix Medema , from Wageningen University in the Netherlands. Marnix is … miners use, including antiSMASH, MIBiG, and newer efforts, like BiG-scape and BiG-SLiCE, and now the BiG-FAM database … And you can color these nodes. For example, based on taxonomy, or based on class of biosynthetic pathways, et …

… Virophages are small viruses with double-stranded DNA genomes that co-infect eukaryotic cells along with giant viruses. Virophages are small viruses with double-stranded DNA … maturation. Recently reported in  Microbiome , researchers from the US Department of Energy (DOE) Joint Genome …

… Prodcast. And it’s our conversation with Nadine Ziemert from the University of Tübingen in Germany. Like me, she’s a … Usually, in a lot of cases, we still have to go through publications to get proteins, and their functions, and all … a lot of problems that we notice as well is, for example, taxonomy. It’s always wrong. So we need a standard in that. …

… archaea, and micro-eukaryoes, along with their associated viruses and mobile genetic elements. Beyond exploring and … regulation, and noncoding RNAs in microbiomes. The insights from this work have the potential to drive innovations in … of complete or near-complete population genomes directly from the environment. These advances have led to …

… The majority of JGI projects come from the user community. Find out about JGI’s calls for … the JGI User Agreement will be an authorized representative from your institution (usually a legal counsel … such as the project name, current status, NCBI & JGI taxonomy, and data locations on the various JGI Portals. The …