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… The Metagenome Program focuses on the high-throughput sequencing of microbial communities to uncover … a snapshot of microbial diversity and their metabolic functional potential. This research enables us to better … microbial ecosystems.  The Program also aims to build a global-scale catalog of viral, microbial, and microeukaryote …

… that the data produced by the facility result in scientific publications. JGI users and collaborators have the right to produce manuscripts for publication and the responsibility for leading the efforts … facility, provided this is done in a timely fashion. The publications resulting from such efforts should specify the …

… and interpretation is creating new opportunities for breakthrough discoveries and catalyzing a major transition of … of host-virus interactions, the exploration of the functional dark matter as well as the development of novel methods to … Pavlopoulos GA et al. (2023) Unraveling the functional dark matter through global …

… Bacteria and Archaea has steadily been widening since 2005. This gap is also reflected in the strongly biased … cells are characterized and selected as based on a specific functional trait or phenotype of interest, prior to and in … into the phylogeny and coding potential of microbial dark matter. Nature 499, 431-7 (2013). Hess M., Sczyrba A., …

… faculty will work with undergraduates in the analysis and publication of the claimed genome sequences. This … recruit new talent for biosciences.  Adopt-a-Genome has: ~20 faculty from institutions across the country Efforts in … development and adoption of classroom modules Currently 206 genomes have been selected with 11 published manuscripts …

… the JGI’s focus on expanding molecular capabilities and functional genomics, scaling capacity through end-to-end automation — and further advancing … a multiplexed DAP-seq (multiDAP-seq) method allowing high-throughput processing of samples in 96-well plates on …

… and viruses. We develop computational approaches to sift through thousands of metagenomes for signatures of viruses … of microbial ecology and metabolism by elucidating the functional potential of hard-to-culture microorganisms. This … (Hungate et al. 2015). With the development of high-throughput SIP (Nuccio et al. 2022) and terabase-scale …

… Microbes drive critical ecosystem functions and affect global nutrient cycling, however they do so under strong … this question in natural soil ecosystems by combining metagenomics with other omics approaches, including … Multiomics approaches such as metagenomics and metatranscriptomics provide invaluable …

… viruses in environmental sequence data. We use multi-omics (metagenomics, metatranscriptomics, single cell genomics and … Cataloging Earth's microbial lineages through advanced genomic techniques and computational … on Earth. This ongoing census helps reveal new lineages and functional capabilities in the microbial world. …

… The CSP Functional Genomics call is to enable users to perform state-of-the-art functional genomics research and to help them translate …