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Fungal & Algal Program
The Fungal & Algal Program explores the vast diversity of fungi and algae to unlock their potential for bioenergy, environmental …
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Publication Policy
… that the data produced by the facility result in scientific publications. JGI users and collaborators have the right to produce manuscripts for publication … (see Auspice Statement below) for the generation of sequence or metabolomic data, DNA synthesized, and any …
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Transcriptomic response of the mycoparasitic fungus Trichoderma atroviride to the presence of a fungal prey
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Plant-Microbial Interactions Group
… to study this complexity, including single-cell and spatial transcriptomics barcode-based genetics (RB-TnSeq), and … or low phosphorus), and how cell identity impacts this response. We will eventually construct a bioenergy plant … of plant/environmental responses … Selected Publications … Research Team Alumni … For further details, …
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Publications
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Fungal & Algal Program User Advisory Committee
The Fungal & Algal Program Advisory Committees is chartered by the Science Program Heads and report back to them. The Committee is chartered to render advice, … on the effective management and strategic objectives of the Program. The Committee serves as the Program's key …
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Natural Prodcast Episode 6: Marc Chevrette
… … DAN: You’re listening to the US. .Department of Energy Joint Genome Institute’s “Natural Prodcast,” a … the chemistry of the molecules that get produced changes in response to different selective pressures. It’s really hard … you! We have projects in genome sequencing, DNA synthesis, transcriptomics, metabolomics, and natural products in …
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Partnerships: Adopt-A-Genome
… “Adopt a Genome” is an informal program for faculty to “claim” the JGI’s unpublished microbial genomes, with the … faculty will work with undergraduates in the analysis and publication of the claimed genome sequences. This opportunity, provided …
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Institutional User Agreements
… — before any work can begin, including the submission of samples for sequencing, or the submission of sequencing … Appendix identifies the type of work or specific proposal to be covered under the Agreement. The signing official must … rights in technical data, project reporting to the DOE, and publication requirements. An official with authority is …
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Natural Prodcast Episode 11: Marnix Medema
… … Dan Udwary: You’re listening to the Department of Energy Joint Genome Institute’s Natural Prodcast, a … an antifungal. It could also be perhaps eliciting a response by another bacterium, for example. But at least we … types of data, including expression data, use of metatranscriptomics, where you measure gene expression levels of …
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Partnerships: Myco-Ed
The Mycological Curriculum for Education and Discovery  (Myco-Ed) is a … Undergraduate Research Experience (CURE) that consists of coordinated hands-on experiments across fungal biology teaching labs. The purpose of the program is to: train students and professors in laboratory techniques …
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Data Policy
Data produced and released by the US Department of Energy (DOE) Joint Genome Institute (JGI) are subject to the following Data Policy. It is our mission to support … PIs or co-PIs) who wish to include use-restricted data in publications, or who wish to redistribute data in any way …
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