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Publication Policy
The JGI has a strong interest in seeing that the data produced by the facility result in scientific publications. JGI users and collaborators have the right to … (see Auspice Statement below) for the generation of sequence or metabolomic data, DNA synthesized, and any …
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Fungal & Algal Program
The Fungal & Algal Program explores the vast diversity of fungi and algae to unlock their potential for bioenergy, … international research team in collaboration with the JGI. Conserved Fungal Genes of Unknown Function offer a collection of fungal genes …
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Metabolomics Program
The JGI’s Metabolomics Program works to uncover the roles of small molecules in biological systems, linking them with … cycling and health, terrestrial biogeochemical processes, development of high performance plants and microbes, and … Combining collected metabolomics data with genomics, transcriptomics, imaging, and other data from EcoFAB systems …
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Partnerships Development Team
… who haven't yet partnered with the JGI. The Business Development Team works closely with the Berkeley Lab Intellectual Property Office to facilitate these new interactions.  The PDT … offers single-step genomic integration and prototyping of complex pathways. The team will be working with LanzaTech to …
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Plant-Microbial Interactions Group
… to study this complexity, including single-cell and spatial transcriptomics barcode-based genetics (RB-TnSeq), and … We will eventually construct a bioenergy plant single-cell atlas comprising Sorghum, Switchgrass, and Brachypodium … of plant/environmental responses … Selected Publications … Research Team Alumni … For further details, …
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Secondary Metabolites Program
Secondary Metabolites Program focuses on the exploration of secondary metabolites across bacteria, fungi, algae and … the resilience and productivity of bioenergy crops. … Development of cell-free based expression platforms: Only … based on extensive computational analyses of BGC size and complexity, BGC sequence composition, metabolic similarity & …
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Partnerships: Adopt-A-Genome
… faculty will work with undergraduates in the analysis and publication of the claimed genome sequences. This opportunity, provided … with over 20 more in draft Efforts in ongoing curriculum development and adoption of classroom modules Testimonials: …
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Publications
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Transcriptomic atlas of mushroom development reveals conserved genes behind complex multicellularity in fungi
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Natural Prodcast Episode 13: Francisco Barona Goméz
… … DAN UDWARY: You’re listening to the Department of Energy Joint Genome Institute’s Natural Prodcast– a … you. We have projects in genome sequencing, DNA synthesis, transcriptomics, metabolomics, and natural products in … of natural product biosynthesis in bacteria ” The ActDES publication came out after we talked. It looks like a great …
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Natural Prodcast Episode 9: Roger Linington
… … DAN: Welcome back for episode 9 of Natural Prodcast. This week, Alison and I talk to Roger … he’s been leading an effort to build The Natural Product Atlas , or NPAtlas, a freely accessible natural products … you! We have projects in genome sequencing, DNA synthesis, transcriptomics, metabolomics, and natural products in …
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DNA Synthesis Program
The JGI’s DNA Synthesis Program supports a wide range of projects, from single-gene synthesis to the synthesis of entire chromosomes, advancing the development of biofuels, biochemicals and other bioenergy … cutting-edge research in synthetic biology by synthesizing genes, pathways, and whole chromosomes for bioenergy and …
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