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The page you requested does not exist. For your convenience, a search was performed using the query publication toward an online repository of standard operating procedures sops for metagenomic annotation.

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Publication Policy
… The purpose of this policy is to establish communication norms around … to a research project are appropriately recognized and credited for their work, while also adhering to the … that the data produced by the facility result in scientific publications. JGI users and collaborators have the right to …
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Products
… The JGI has diverse capabilities in: DNA and RNA sequencing, Sample and library preparation, … Mass spectrometry based metabolomics Below is a table of standard product offerings, including a description of … Raw metabolomics data is submitted to the  MassIVE repository . Not all products are available for all proposal …
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Metagenome Program
… The Metagenome Program uses advanced sequencing technologies to decode the genomes of microbes in their natural environments. This work … diversity and metabolic potential, with implications for energy production, environmental sustainability, and … microbial communities to uncover the complex interactions and functions that shape ecosystems. By decoding the …
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Toward an Online Repository of Standard Operating Procedures (SOPs) for (Meta)genomic Annotation
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Partnerships: Adopt-A-Genome
… “Adopt a Genome” is an informal program for faculty to “claim” the JGI’s … faculty will work with undergraduates in the analysis and publication of the claimed genome sequences. This opportunity, provided … purpose of this project is to bring educators from a broad range of disciplines up-to-speed with some of the latest …
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DOE Metrics
… 2026 DOE Metrics Sequencing Quarter Total Bases (Trillions) Operating Hours Goal  Actual Total*   Actual % of Goal   Goal (hours)**   Actual Total   Actual % Goal   FY …     2,164     Q4 2026 175     2,208     *Includes Illumina and PacBio sequencing platforms. **Operating Hours target is …
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Operating Expenses
… FY2025 Spending Profile The JGI is funded primarily by the DOE Office of Biological and Environmental Research (BER), a program within the DOE …
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Data Policy
… Data produced and released by the US Department of Energy (DOE) Joint Genome Institute (JGI) are subject to … Data Policy. It is our mission to support open data and information sharing. We also recognize the need to have a … PIs or co-PIs) who wish to include use-restricted data in publications, or who wish to redistribute data in any way …
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Publications
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Environmental Genomics Group
… on using genome-resolved metagenomic approaches to identify and characterize genomic information from uncultivated microbes and viruses. We develop computational approaches to sift through thousands of metagenomes for signatures of viruses and novel microbial …
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Institutional User Agreements
… approved proposal starts with a User Agreement — before any work can begin, including the submission of samples for sequencing, or the submission of sequencing … rights in technical data, project reporting to the DOE, and publication requirements. An official with authority is …
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Microbial Program
… Microbial Program focuses on using cutting-edge sequencing, annotation and analysis techniques to explore the vast and diverse world of microbes. Studying bacteria and archaea, including those … inter-organismal interactions. These insights are crucial for addressing key environmental challenges, such as …
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