Search

… Dan Udwary: You’re listening to the Department of Energy Joint Genome Institute’s Natural Prodcast, a … about the basics of genome mining, which is using DNA sequence to identify and interpret biosynthetic, secondary … That’s an amazing story. I’ll have to share that with my partner later. So thank you. Marnix Medema: With your partner? …

… The purpose of this policy is to establish communication norms around … that the data produced by the facility result in scientific publications. JGI users and collaborators have the right to … (see Auspice Statement below) for the generation of sequence or metabolomic data, DNA synthesized, and any other …

… faculty will work with undergraduates in the analysis and publication of the claimed genome sequences. This opportunity, provided by the Joint Genome … necessary to extract meaningful biological insights from sequence data, employing IMG data and tools for comparative …

… and affect global nutrient cycling, however they do so under strong constraints exerted by viruses. Research in the … group aims at improving our collective understanding of ecological and evolutionary parameters driving virus:host … involves both experimental and computational exploration of uncultivated viral diversity, characterization of …

… research is focused on the discovery and characterization of novel bacterial, archaeal and eukaryotic microbes and viruses in environmental sequence data. We use multi-omics (metagenomics, … to identify new divergent lineages and expand the Tree of Life. We then investigate the coding potential to find …

… approaches to identify and characterize genomic information from uncultivated microbes and viruses. We develop computational approaches to sift through thousands of metagenomes for signatures of viruses and novel microbial … capture microbial and viral diversity, leading to a better understanding of microbial communities and ecosystem …

… The JGI’s Metabolomics Program works to uncover the roles of small molecules in biological systems, linking them with genomic data to enhance our understanding of genome science, organisms, and ecosystems … metabolomics fuels the discovery  of novel metabolites, genes, and proteins. It also enables exploration of energy …

… And we’ve done some work with those and have a couple of publications out there on the chemistry. There’s so much … with any kind of gene cluster identification, doing it with sequence alone you have to have some kind of a template to … because we’re a user facility, if you’re interested in partnering with us, we want to hear from you. We have projects …

… Secondary Metabolites Program focuses on the exploration of secondary metabolites across bacteria, fungi, algae and plants. These molecules, which are not essential for fundamental growth, provide critical advantages to the … Program targets the vast and underexplored reservoir of secondary metabolites produced by bacteria, fungi, algae …

… to environmental changes. The program lays the groundwork for sustainable solutions to current problems facing humanity. A major focus are biofuel feedstock species and plant-microbe interactions, … a plant based bioeconomy where plants are a major source of chemical production and contribute to a healthier planet …