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Publication Policy
… that the data produced by the facility result in scientific publications. JGI users and collaborators have the right to produce manuscripts for publication and the responsibility for leading the efforts … facility, provided this is done in a timely fashion. The publications resulting from such efforts should specify the …
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Partnerships: Adopt-A-Genome
… program for faculty to “claim” the JGI’s unpublished microbial genomes, with the expectation that faculty will work with undergraduates in the analysis and publication of the claimed genome sequences. This … by the Joint Genome Institute, builds upon thousands of microbial genomes that have been sequenced by the JGI though …
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Microbial Program
… The JGI’s Microbial Program focuses on using cutting-edge sequencing, … provides high-quality, large-scale genomic data to advance microbial research that drives sustainable solutions in … The Microbial Program focuses on using advanced sequencing technologies to explore microbial diversity — with an emphasis on bacteria and …
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Publications
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Thermochemical wastewater valorization via enhanced microbial toxicity tolerance
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Environmental Genomics Group
… of metagenomes for signatures of viruses and novel microbial lineages, and reconstruct metabolic properties … within those genomes. Our aim is to more fully capture microbial and viral diversity, leading to a better understanding of microbial communities and ecosystem function.  The …
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New Lineages of Life Group
… Cataloging Earth's microbial lineages through advanced genomic techniques and … reveal new lineages and functional capabilities in the microbial world. … A complete publication list available at Google Scholar. Dutkiewicz, Z. … A.I., Mars Brisbin, M., Hu, S.K. et al. (2024) “ Missing microbial eukaryotes and misleading meta-omic conclusions …
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Metagenome Program
… genetic elements. Beyond exploring and characterizing microbial diversity, work in the Metagenome Program uses several experimental approaches to assess microbial activity across ecosystems.  By studying microbial communities and their interactions, the Program …
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Plant Microbial Interactions Group
… including fungal and bacterial symbionts, detrimental microbial pathogens, and associated viruses that all … how plants self-organize, influence, and are influenced by microbial partners. We use a variety of genomics-powered … Selected Publications …
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JGI Portals
… has replaced the JGI Genome Portal . Book a session via the appointment calendar for technical help, feedback or … Download plant, algal, fungal and microbial genomes and metagenomes — top-quality genomic … provides tools for analyzing the functional capability of microbial communities based on their metagenome sequence, in …
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Natural Prodcast Episode 7: Ben Shen
… So, this family of substances is always associated with toxicity, basically, killing cells. ALISON: Right, because … one, first that we call antibody drug conjugates, abbreviated as “ADC”, was approved in the year 2000, and utilize … genomic revolution, to me, as a natural part chemist for microbial natural product, is that I love microbial natural …
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Mission
… crops, enhance biomass conversion efficiency, and discover microbial pathways for producing biofuels, biochemicals, and … Critical Minerals and Materials (CMM): Genomic studies of microbial and plant metabolism reveal biological routes to … including biogas, greenhouse gases, climate change, wastewater treatment, sewage, solid or liquid waste, …
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