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Publication Policy
… The purpose of this policy is to establish communication norms around JGI … that the data produced by the facility result in scientific publications. JGI users and collaborators have the right to … acknowledgment (see Auspice Statement below) for the generation of sequence or metabolomic data, DNA synthesized, …
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Fungal & Algal Program
… The Fungal & Algal Program explores the vast diversity of fungi and algae to unlock their potential for bioenergy, environmental sustainability, and … By sequencing and analyzing the genomes of these organisms, the program investigates the biological mechanisms …
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Natural Prodcast Episode 20: Brian Bachmann
… DAN UDWARY: Hey everyone and welcome back to a new session of Natural Prodcast. I’ve got two things I wanted to tell you … or you could look at metabolism markers like phosphoprotein S6. So if there is a perturbagen present– DAN … maybe– I don’t know– start to put some of these things into boxes more than they are right now. But yeah, at the end of …
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The F-box protein gene exo-1 is a target for reverse engineering enzyme hypersecretion in filamentous fungi
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Natural Prodcast Episode 13: Francisco Barona Goméz
… DAN UDWARY: You’re listening to the Department of Energy Joint Genome Institute’s Natural Prodcast– a … be the amino acid that is relevant for the synthesis of proteins, and will more often end up in the active site of an enzyme. So there is no promiscuity, generally speaking, in primary metabolism. Nevertheless, …
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Publications
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DNA Synthesis Program
… The JGI’s DNA Synthesis Program supports a wide range of projects, from single-gene synthesis to the synthesis of entire chromosomes, … has been a pioneering effort in functional genomics since 2012, with a focus on addressing critical energy and … The DNA Synthesis Program plays a central role in advancing functional genomics, focusing on developing genetic systems …
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Natural Prodcast Episode 8: Eric Schmidt
… DAN: You’re listening to the US Department of Energy Joint Genome Institute’s “Natural Prodcast,” a … on this: Most of the machinery in any living organism are proteins, which are made up of chains of amino acids. … see as the overall “theme” of your research? I know you’ve generally worked in various marine organisms. Except during …
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Natural Prodcast Episode 23: Aaron Puri
… DAN: Hey, everybody. Welcome back for another episode of Natural Prodcast. Right now I’m … more structural diversity — so that one uses acyl carrier proteins as co-substrate. So the other ones they use CoA … of. And so we’ve been doing that a lot now with aromatic carboxylic acids, things like that. And I’m really excited …
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Products
… engineering Mass spectrometry based metabolomics Below is a table of standard product offerings, including a description of the … Program leads to discuss available options. Note: In 2021, we conducted an extensive internal product audit to … Scientific Program Product Description Deliverables Cycle Time FY25 …
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Natural Prodcast Episode 10: A Primer on Genome Mining
… DAN UDWARY: You’re listening to the Department of Energy Joint Genome Institute’s Natural Prodcast, a … and how we do it here and maybe give an example of a recent publication. ALISON TAKEMURA: Awesome. Yeah, let’s dive in, … homology based, but then you’re using kind of a black box for the rule set. (Like antiSMASH, DeepBGC is an open …
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Natural Prodcast Episode 14: Nigel Mouncey
… DAN: Hello, everyone, and Welcome back for Episode 14 of Natural Prodcast . There’s been a lot … and I just saw this pop up. And saw a C&E News job little box and I thought, wow, this would be fantastic. What a … help the Society grow. And so I’ve been the chair of the publications committee for the last, what is it now, five …
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