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… that the data produced by the facility result in scientific publications. JGI users and collaborators have the right to … of sequence, metabolomics, and functional genomics data types as well as in advanced assembly and engineering … maximize the impact of user research. The crucial elements are  proposal Award DOI(s), JGI’s ROR ID number, DOE …

User Agreement and Appendix. An Appendix identifies the type of work or specific proposal to be covered under the … rights in technical data, project reporting to the DOE, and publication requirements. An official with authority is … , DNA Synthesis Appendix  and DNA Sequencing Appendix are available for download.)  After your home institution …

US Department of Energy (DOE) Joint Genome Institute (JGI) are subject to the following Data Policy. It is our mission … to have a limited and time-sensitive protection of certain types of data to support their use by those generating data. … PIs or co-PIs) who wish to include use-restricted data in publications, or who wish to redistribute data in any way …

… it’s more complicated than working with something like E. coli , but it’s doable. And that was a big part of my … And yeah, so the tundripaludum part there comes– the type strain was isolated from Svalbard Norway so right there … up on previous Natural Prodcast episodes  here . Show Notes Publication: Suo Z et al. A Mesorhizobium japonicum quorum …

… bacteria, fungi, algae and plants. These molecules, which are not essential for fundamental growth, provide critical … secondary metabolite synthesis. We are currently exploring  Escherichia coli and  Streptomyces lysate systems. Deciphering …

When submitting sequences to the JGI DNA Synthesis program, please include the … Sequence files for all constructs should be emailed to  Miranda Harmon-Smith, Synthetic Biology Project Manager . … How To Create an Annotated GenBank File There are several easy-to-use open source tools for converting DNA …

… faculty will work with undergraduates in the analysis and publication of the claimed genome sequences. This … knowledge and no dedicated compute infrastructure is required to perform computational analysis. IMG/M user … contact Rekha Seshadri . …       " A lot of our students are working 20, 30, 40 hours a week outside of school . They …

… is submitted to the  MassIVE repository . Not all products are available for all proposal calls.   Please review the … Constructs <5kb in size Single gene or multiple small genes assembled to less than 5kb in length, cloned into … sequencing using long-read sequencing. Exact library types and quality of finished product depend on genome. …

The JGI’s Metabolomics Program works to uncover the roles of small molecules in biological … metabolomics fuels the discovery  of novel metabolites, genes, and proteins. It also enables exploration of energy … microbiome interactions. The  insights derived are crucial for advancing the bioeconomy, environmental …

… into a high chemical diversity. So that’s just the type of relationship between the natural forces, the … probably you will shut down the pathway just like E. coli , and therefore it is a secondary metabolite, because … of natural product biosynthesis in bacteria ” The ActDES publication came out after we talked. It looks like a great …