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… focuses on using cutting-edge sequencing, annotation and analysis techniques to explore the vast and diverse world of … cycling and inter-organismal interactions. These insights are crucial for addressing key environmental … and archaeal lineages to improve phylogenetic analysis, metagenomic annotations, and function distribution. These …

… that the data produced by the facility result in scientific publications. JGI users and collaborators have the right to … synthesized, and any other contributions, such as assembly, analysis, annotation, verification, creation of genome … our policy on research data and analysis products produced through all user projects accepted FY22 and later. … Read …

… faculty will work with undergraduates in the analysis and publication of the claimed genome sequences. This … and skills necessary to extract meaningful biological insights from sequence data, employing IMG data and tools … was our first paper . It was definitely interesting going through the whole process of submitting, getting feedback , …

… that govern ecosystem processes. This research provides insights into microbial diversity and metabolic potential, … ecosystems. … The Metagenome Program focuses on the high-throughput sequencing of microbial communities to uncover … Metagenome Program combines large-scale, time-series metagenomic data with detailed characterization of model …

The IMG group owns and maintains integral components of JGI’s production workflow, and is responsible for the annotation and analysis of (meta)genomic, (meta)transcriptomic, and … to confidently assign species to nearly 326 genomes. Through the analysis of cliques, it has also become possible …

… means to begin filling this gap. A primary goal is to get  insights into the coding potential of candidate phyla  to … Amann R., Bergin C., Ruehland C., Rubin E.M. & Dubilier, N. Symbiosis insights through metagenomic analysis of a … … Research Interests … Former Lab Members … Selected Publications … For further details, please reach out to the …

… in the Eloe-Fadrosh group focuses on using genome-resolved metagenomic approaches to identify and characterize genomic … and viruses. We develop computational approaches to sift through thousands of metagenomes for signatures of viruses … Microbiology , 15032. 10.1038/nmicrobiol.2015.32 … Selected Publications … For further details, please reach out to the …

… and interpretation is creating new opportunities for breakthrough discoveries and catalyzing a major transition of … Genes. Cell 178(5):1245-1259 Nayfach S, et al, (2019) New insights from uncultivated genomes of the global human gut … Science 344(6186):909-13 … Research Efforts … Selected Publications … For further details, please reach out to the …

… data. The JGI Data Policy applies to research data and analysis products (referred to as “data” for the remainder of this policy) produced through all user projects accepted FY22 and later through … PIs or co-PIs) who wish to include use-restricted data in publications, or who wish to redistribute data in any way …

… microbes, and understanding microbiome interactions. The  insights derived are crucial for advancing the bioeconomy, … samples — including microbes, fungi, plants and soils. Through a combination of experimental workflows and computational analysis, JGI scientists are able to link metabolic activity …

The User Support Analysis group provides computational analysis for new … epigenomics. Our work varies in scope from the development of highly customized analysis workflows for new product …