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Publication Policy
… that the data produced by the facility result in scientific publications. JGI users and collaborators have the right to produce … and any other contributions, such as assembly, analysis, annotation, verification, creation of genome browsers, etc. … JGI Staff: Upon request, JGI staff will provide Users with a list of contributors and their corresponding …
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Partnerships: Adopt-A-Genome
… “Adopt a Genome” is an informal program for faculty to “claim” the JGI’s … faculty will work with undergraduates in the analysis and publication of the claimed genome sequences. This … JGI products and services while nurturing a fresh cohort of users Reach the next generation of genome scientists and …
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User Support
… science. DOE JGI Project Managers collaborate with users to develop project requirements, define the scope of … and coordinating with IMG , GOLD and others for data annotation and submission Tracking, monitoring and … access your data, share with collaborators, and coordinate publication with JGI scientists. Synthetic DNA constructs …
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Microbial Program
… The JGI’s Microbial Program focuses on using cutting-edge sequencing, annotation and analysis techniques to explore the vast and … The Microbial Program focuses on using advanced sequencing … lineages to improve phylogenetic analysis, metagenomic annotations, and function distribution. These are derived …
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Environmental Genomics Group
… Research in the Eloe-Fadrosh group focuses on using genome-resolved … computational approaches to sift through thousands of metagenomes for signatures of viruses and novel microbial lineages, and reconstruct metabolic properties … of hard-to-culture microorganisms. This process enables our users to explore the genetic makeup of microbial …
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Institutional User Agreements
… Every approved proposal starts with a User Agreement — before any work can begin, including the submission of samples for sequencing, or … rights in technical data, project reporting to the DOE, and publication requirements. An official with authority is … required paperwork to your institution. (Samples of the JGI User Agreement , JGI User Agreement for Federal Agencies , …
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Metagenome Program
… The Metagenome Program uses advanced sequencing technologies to decode the genomes of microbes in their natural environments. This work … genetic elements. Beyond exploring and characterizing microbial diversity, work in the Metagenome Program uses … Program is to develop a deeper understanding of microbial community assembly and microbial interactions, including …
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User Programs
… For accepted proposals, sequencing, synthesis, metabolomics and analysis will be paid for … of Energy’s funding of the JGI. There is no cost to the user and no granting of funds.    Proposal Call FICUS CSP … that integrate the expertise and capabilities of multiple user facilities Investigators with DOE mission-relevant …
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User Support Analysis Group
… The User Support Analysis group provides computational analysis for new technology development and JGI user science projects. We perform analysis for diverse experiment types, with main focus areas being genome variation, transcriptomics and …
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User Advisory Committees
… All staff members of the US Department of Energy (DOE) Joint Genome Institute (JGI) commit to Lawrence Berkeley National Lab’s … values, which guide the relationships we nurture in our workplace and seek to establish with our … The UEC represents the JGI user community and is responsible for providing input and advice …
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User Executive Committee
… The UEC represents the JGI user community and is responsible for providing input and … scientific community, and promotes communication and collaboration within the user community. …
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How To Use Our Systems
… One of the JGI’s key assets is our user community, comprising a broad range of researchers and … have yielded numerous, high-quality outputs, such as data, publications and software. The JGI supports the entire data … Looking for BBTools? Find it here.  …
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