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Publication Policy
… that the data produced by the facility result in scientific publications. JGI users and collaborators have the right to produce manuscripts for … (see Auspice Statement below) for the generation of sequence or metabolomic data, DNA synthesized, and any …
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Partnerships: Adopt-A-Genome
… “Adopt a Genome” is an informal program for faculty to “claim” the JGI’s … faculty will work with undergraduates in the analysis and publication of the claimed genome sequences. This opportunity, provided …
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Publications
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Natural Prodcast Episode 11: Marnix Medema
… … Dan Udwary: You’re listening to the Department of Energy … suppressive effect. But well, causal gene so that the mechanisms were still largely unknown. And thus far in the …
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Fungal & Algal Program
The Fungal & Algal Program explores the vast diversity of fungi and algae to unlock their potential for bioenergy, … of these organisms, the program investigates the biological mechanisms that enable fungi and algae to play a vital role …
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Metabolomics Program
The JGI’s Metabolomics Program works to uncover the roles of small molecules in biological systems, linking them with genomic data to enhance our understanding of genome science, organisms, and … in your custom Python applications but highly recommend using the workflow in  GNPS2 .   … In support of user …
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User Support Analysis Group
The User Support Analysis group provides computational analysis for new … types, with main focus areas being genome variation, transcriptomics and epigenomics. Our work varies in scope from the development of highly customized analysis workflows for new product …
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Plant Program
… to current problems facing humanity. A major focus are biofuel feedstock species and plant-microbe interactions, … and integrating various data types to explore the molecular mechanisms behind phenotypic evolution. It also utilizes … the ability to discover syntenic orthologs, generate publication quality graphics and explore pangenome views of …
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Salinity tolerance mechanisms of an Arctic Pelagophyte using comparative transcriptomic and gene expression analysis
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Microbial Program
The JGI’s Microbial Program focuses on using cutting-edge sequencing, annotation and analysis techniques to explore the vast and diverse world of microbes. Studying bacteria and archaea, including those …
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Products
The JGI has diverse capabilities in: DNA and RNA sequencing, Sample and library preparation, DNA … Mass spectrometry based metabolomics Below is a table of standard product offerings, including a description of … Fungal Standard Draft Whole genome shotgun sequencing using long-read sequencing. Exact library types and quality …
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Natural Prodcast Episode 23: Aaron Puri
… … DAN: Hey, everybody. Welcome back for another episode of … up on previous Natural Prodcast episodes  here . Show Notes Publication: Suo Z et al. A Mesorhizobium japonicum quorum …
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