Search

… that the data produced by the facility result in scientific publications. JGI users and collaborators have the right to … assembly, analysis, annotation, verification, creation of genome browsers, etc. The users, collaborators and JGI … "Advanced Search" next to the search bar. Using the "Search Within" dropdown, select "Proposals". Search for your …

The JGI’s Microbial Program focuses on using cutting-edge sequencing, … driven prioritization lists for laboratory isolation and genome sequencing of underexplored bacterial and archaeal … distribution. These are derived from isolates and single cells. This effort uncovers novel genes, protein families, …

The Metagenome Program uses advanced sequencing technologies to … sequencing of microbial communities to uncover the complex interactions and functions that shape ecosystems. By … inquires to Simon Roux, who is the Viral Genomics Lead within the program.  … Resources and Tools …

… “Adopt a Genome” is an informal program for faculty to “claim” the … faculty will work with undergraduates in the analysis and publication of the claimed genome sequences. This … and services while nurturing a fresh cohort of users Reach the next generation of genome scientists and recruit …

… of interest. One such effort is targeted at environmental cells that are from candidate phyla, major branches in the … … Research Interests … Former Lab Members … Selected Publications … For further details, please reach out to the Group Lead …

… data and serving them to users via the Integrated Microbial Genomes & Microbiomes (IMG/M) system. Research Team    … The … it has also become possible to identify speciation events within existing species. Within the JGI’s production … ANI is used to ascertain the species specificity of single cells and genomes extracted from metagenomes, and also as a …

… technology in order to enhance the quality of single-cell genomes and directly link functional information with individual cells. Research Team    … The JGI uniquely offers the first … metagenomics: … Single cell: … For further details, please reach out to the Group Lead …

Research in the Eloe-Fadrosh group focuses on using genome-resolved metagenomic approaches to identify and … Microbiology , 15032. 10.1038/nmicrobiol.2015.32 … Selected Publications … For further details, please reach out to the Group Lead …

… of viral infections. The Viral Genomics Group is hosted within the Environmental Genomics group . Research Team … … al. (2019) Minimum Information about an Uncultivated Virus Genome (MIUViG).  Nature Biotech .  37 , 29–37 Roux S, et … abundant ocean viruses.  Nature . 537:689-93. … Selected Publications … For further information contact the Group …

… that call. Learn more about the  average base outputs for each product. For custom requests not on this list, or to … Fungal Minimal Draft Lower coverage short-read whole genome shotgun sequencing Assembly, annotation ( Mycocosm ) … microbial aggregate, or a specific subset of free-living cells. Extracted DNA may be amplified using whole-genome …

… to organisms' interactions with their environments and with each other, from defending against predators to aiding in … systems to express BGCs that alleviate the constraints of cells and allow for substrates to be directed towards … factors and determine their binding sites across multiple genomes. Computational prediction of heterologous …