Results
… ensure that all contributors to a research project are appropriately recognized and credited for their work, … that the data produced by the facility result in scientific publications. JGI users and collaborators have the right to … so, and JGI expects acknowledgment (see Auspice Statement below) for the generation of sequence or metabolomic data, …
Learn more
… to current problems facing humanity. A major focus are biofuel feedstock species and plant-microbe … discoveries support a plant based bioeconomy where plants are a major source of chemical production and contribute to … and agricultural productivity. Research spans diverse areas — from understanding how terrestrial plants and …
Learn more
… faculty will work with undergraduates in the analysis and publication of the claimed genome sequences. This … Muricoccus roseus DSM 14916T, isolated from a children’s care center in Finland. Microbiol Resour Announc 0:e00891-25. … R. Seshadri, M. Escobar. Draft genome sequences of two bacterial type strains isolated from a methanogenic …
Learn more
… is focused on the discovery and characterization of novel bacterial, archaeal and eukaryotic microbes and viruses in … A complete publication list available at Google Scholar. Dutkiewicz, Z. … danicum gen. nov., sp. nov. in the ubiquitous bacterial phylum Patescibacteriota phyl. nov .” ISME …
Learn more
… Plants are complex organisms that harbor a fantastic diversity of … cell types and associated organisms, including fungal and bacterial symbionts, detrimental microbial pathogens, and … viruses that all contribute to a dynamic ecosystem. We are interested in how plants self-organize, influence, and …
Learn more
… the sequencing and comparative analysis of thousands of archaeal and bacterial type strains ( GEBA-type strains project ), the … 578(7795):432-436 Sberro H, et al. (2019) Large-Scale Analyses of Human Microbiomes Reveal Thousands of Small, … Mukherjee S, et al. (2017) 1,003 reference genomes of bacterial and archaeal isolates expand coverage of the tree …
Learn more
… cycling and inter-organismal interactions. These insights are crucial for addressing key environmental challenges, … laboratory isolation and genome sequencing of underexplored bacterial and archaeal lineages that are important for bioeconomy … space: The JGI generates reference genomes from diverse bacterial and archaeal lineages to improve phylogenetic …
Learn more
… it into the feeds, but I’m trying, you guys. Schedules are hard. But, I’m working on it because I really do want … back up through the sediment it’ll get to this Goldilocks zone where there’s some oxygen available that has diffused … cluster with me because it turns out that oftentimes in bacterial genomes if you have a quorum sensing system or the …
Learn more
… pipelines (MVP) and databases (IMG/VR) for viromics analyses … In silico host prediction for uncultivated phages and archaeal viruses … Integrated pipelines for viromics analyses … Selected Publications … Research Areas … Software …
Learn more
… such effort is targeted at environmental cells that are from candidate phyla, major branches in the phylogenetic … to provide valuable reference genomes in under-populated areas of the tree of life, as reference genomes are critical to serve as phylogenetic anchors for …
Learn more

