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Plant Program
… With collaborative user projects, the JGI’s Plant Program delves into the natural world’s potential to … to environmental changes. The program lays the groundwork for sustainable solutions to current problems facing humanity. A major focus … The Plant Program advances our understanding of plants’ …
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Single Cell Research Group
… Research in the Woyke laboratory focuses on the utility of single-cell methods to access genetic material of uncultivated taxa of interest. One such effort is targeted at environmental cells that are from … of which belong to only three phyla. The Woyke group uses single-cell sequencing as a means to begin filling this gap. …
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Publication Policy
… research project are appropriately recognized and credited for their work, while also adhering to the authorship … that the data produced by the facility result in scientific publications. JGI users and collaborators have the right to produce manuscripts for publication and the responsibility for leading the efforts …
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Sequencing Technologies & Products
… automation — and further advancing sequence applications, single cell genomics, DNA synthesis, and metabolomics … An assay used for profiling transcription factor binding sites across … samples in 96-well plates on automated liquid handler platforms, substantially increasing efficiency and scalability. …
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Plant Microbial Interactions Group
… Plants are complex organisms that harbor a fantastic diversity of cell types and associated organisms, including fungal and … genomics-powered tools to study this complexity, including single-cell and spatial transcriptomics barcode-based … Plant microbiomes hold the amazing ability to influence …
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Microbial Program
… inter-organismal interactions. These insights are crucial for addressing key environmental challenges, such as … data to advance microbial research that drives sustainable solutions in energy, agriculture and ecosystem management. … of bacteria and archaea in their natural environments using single cell approaches. This includes linking strain-level …
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FICUS
… The Facilities Integrating Collaborations for User Science (FICUS) call represents a unique … will be provided for free to the PI by the Department of Energy’s funding of the JGI. There is no cost to the user … provides customized analysis, the JGI also participates in publication of results. …
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Mission
… JGI Mission As a U.S. Department of Energy Office of Science user facility, we provide advanced … research community in studies of complex biological and environmental systems. We optimize our service to the … and Materials (CMM): Genomic studies of microbial and plant metabolism reveal biological routes to recover, reuse, …
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Natural Prodcast Episode 14: Nigel Mouncey
… with a contract manufacturer to actually have them build a plant for production and fermentation and transfer that … and the stabilized isotope probing work that we’re doing, single cell work we’re doing. And using these together along … help the Society grow. And so I’ve been the chair of the publications committee for the last, what is it now, five …
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Data Ecosystem
… biology. The collaborations present exciting possibilities for scientific exploration, granting access to diverse … of how organisms interact with each other and with their environment and help unravel these complexities  This … way. We also work with our partners to ensure platforms are future-ready for advancements enabled by …
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Publications
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Products
… to completion of standard analysis.  Raw data is provided for all sequencing products below. In addition, JGI will … to the  MassIVE repository . Not all products are available for all proposal calls.   Please review the call language … carefully to ensure that your request is appropriate for that call. Learn more about the  average base outputs …
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