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With collaborative user projects, the JGI’s Plant Program delves into the natural world’s potential to … the ability to discover syntenic orthologs, generate publication quality graphics and explore pangenome views of … high-quality de novo assemblies for very large-scale single genomes, based on the JGI assembly tool meraculous. …

Research in the Woyke laboratory focuses on the utility of single-cell methods to access genetic material of uncultivated taxa … … Research Interests … Former Lab Members … Selected Publications … For further details, please reach out to the …

… that the data produced by the facility result in scientific publications. JGI users and collaborators have the right to produce manuscripts for publication and the responsibility for leading the … HERE IF APPLICABLE) conducted by the U.S. Department of Energy Joint Genome Institute ( https://ror.org/04xm1d337 ), …

… data to advance microbial research that drives sustainable solutions in energy, agriculture and ecosystem management. … … of bacteria and archaea in their natural environments using single cell approaches. This includes linking strain-level genetic …

… of our Community Science Program, characterize organisms (plants and microbes) relevant to the DOE science mission … of microbiomes and manipulate them to facilitate microbial solutions to challenging environmental problems, and/or … plastics. This drives the DOE’s focus on developing lignocellulosic biomass as a clean, renewable and sustainable …

… provides customized analysis, the JGI also participates in publication of results. … Proposals for the annual FICUS … Accessing Resources at Multiple DOE User Facilities with a Single Proposal describes the resources available from the … the spatial, temporal, taxonomic (environmental, microbial, plants, invertebrate, and vertebrate), and thematic scope of …

… with a contract manufacturer to actually have them build a plant for production and fermentation and transfer that … and the stabilized isotope probing work that we’re doing, single cell work we’re doing. And using these together along … help the Society grow. And so I’ve been the chair of the publications committee for the last, what is it now, five …

… percentile*) DNA Synthesis Constructs <5kb in size Single gene or multiple small genes assembled to less than … Assembly, annotation ( IMG/M ), mapping 273/273 Metagenome Cell Enrichments Obtained by physical separation of a … contigs. Assembly, annotation ( IMG ) Depends on project Plant and Algal Standard Draft Whole genome shotgun …

Synthesis Program supports a wide range of projects, from single-gene synthesis to the synthesis of entire … bioinformatics tools and genome portals, we study lignocellulose decomposition, CO2 fixation, redox reactions, and plant metabolite biosynthesis, synthesizing and …

… vast diversity of fungi and algae to unlock their potential for bioenergy, environmental sustainability, and … biofuels, biomaterials, natural products, and environmental solutions, fostering a bioeconomy powered by nature’s … functioning — particularly in their roles associated with plants (mycorrhizae, endophytes, growth promoters, or …

… technology in order to enhance the quality of single-cell genomes and directly link functional information with individual cells. Research Team    … The JGI …