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… that the data produced by the facility result in scientific publications. JGI users and collaborators have the right to … (see Auspice Statement below) for the generation of sequence or metabolomic data, DNA synthesized, and any other contributions, such as assembly, analysis, annotation, verification, creation of genome …

… that faculty will work with undergraduates in the analysis and publication of the claimed genome sequences. This opportunity, provided …

… to regulate Earth's carbon balance, to exploring the genetic basis of how plants have naturally adapted to varied … the accuracy of functional predictions and speed up genome analysis. Additionally, the Plant Program is advancing … the ability to discover syntenic orthologs, generate publication quality graphics and explore pangenome views of …

… uses advanced sequencing technologies to decode the genomes of microbes in their natural environments. This work … along with their associated viruses and mobile genetic elements. Beyond exploring and characterizing … tools and visualization resources that support user analysis of biogeochemically-relevant pathways, enabling …

Data produced and released by the US Department of Energy (DOE) Joint Genome Institute (JGI) are subject to … data. The JGI Data Policy applies to research data and analysis products (referred to as “data” for the remainder … PIs or co-PIs) who wish to include use-restricted data in publications, or who wish to redistribute data in any way …

… research is focused on the discovery and characterization of novel bacterial, archaeal and eukaryotic microbes and … metatranscriptomics, single cell genomics and phylogenomics) and machine learning to identify new … and biogeochemical cycles. Research Team    … A complete publication list available at Google Scholar. Schulz, C …

The User Support Analysis group provides computational analysis for new technology development and JGI user science … epigenomics. Our work varies in scope from the development of highly customized analysis workflows for new product …

Secondary Metabolites Program focuses on the exploration of secondary metabolites across bacteria, fungi, algae and … uncover these hidden biochemical resources by exploring the genetic pathways responsible for their synthesis. The … biosynthetic gene clusters (BGCs), advancing pathway analysis, optimization of cell- and cell free-based …

… artificial Intelligent/machine learning approaches in data analysis and interpretation is creating new opportunities … include exploration of the global diversity of alternative genetic codes (Science 2014), unearthing hundreds of … Science 344(6186):909-13 … Research Efforts … Selected Publications … For further details, please reach out to the …

Developed in 2017, the PDT was established in part to help better-connect … works closely with the Berkeley Lab Intellectual Property Office to facilitate these new interactions.  The PDT … air quality and promoting a circular economy. Acetogenic  Clostridium is considered the most efficient method of …

… focuses on the utility of single-cell methods to access genetic material of uncultivated taxa of interest. One such … E.M. & Dubilier, N. Symbiosis insights through metagenomic analysis of a microbial consortium. Nature 443, 950-5 … … Research Interests … Former Lab Members … Selected Publications … For further details, please reach out to the …