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Publication Policy
… that the data produced by the facility result in scientific publications. JGI users and collaborators have the right to … (see Auspice Statement below) for the generation of sequence or metabolomic data, DNA synthesized, and any … following the guidelines below.  … If you use data from 3 or fewer JGI proposals, include those DOIs in the auspice …
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FICUS Overview
… to more easily integrate the expertise and capabilities of multiple Department of Energy Office of Science National User Facilities into … provides customized analysis, the JGI also participates in publication of results. … All proposals undergo technical …
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Data Policy
Data produced and released by the US Department of Energy (DOE) Joint Genome Institute (JGI) are subject to … Science (BERSS), or Bioenergy Research Centers (BRCs). Overview … Embargo : A period in which data is not publicly … PIs or co-PIs) who wish to include use-restricted data in publications, or who wish to redistribute data in any way …
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Data Ecosystem
… cohesive data standards, the JGI partners with a number of facilities.  … Through its partnership with NERSC and the … to facilitate these efforts. Particular areas of emphasis will be the development of tools and infrastructure for microbiome data science, and …
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Publications
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Metagenome Program
… uses advanced sequencing technologies to decode the genomes of microbes in their natural environments. This work … experimental approaches to assess microbial activity across ecosystems.  By studying microbial communities and their … drive innovations that could advance our understanding of Earth’s ecosystems. … The Metagenome Program focuses on …
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Partnerships: Adopt-A-Genome
… faculty will work with undergraduates in the analysis and publication of the claimed genome sequences. This opportunity, provided … available datasets encompassing >150,000 isolate genomes, 230,000 metagenome-assembled genomes (MAGs), and 40,000+ …
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Overview of the MOSAiC expedition: Ecosystem
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Microbial Program
… analysis techniques to explore the vast and diverse world of microbes. Studying bacteria and archaea, including those … associated with microeukaryotes, enhances our understanding of terrestrial biogeochemical cycling and inter-organismal … drives sustainable solutions in energy, agriculture and ecosystem management. … The Microbial Program focuses on …
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Viral Genomics Group
… group aims at improving our collective understanding of ecological and evolutionary parameters driving virus:host … . Research Team … Coclet, C. and Roux, S. (2021) Global overview and major challenges of host prediction methods for … abundant ocean viruses.  Nature . 537:689-93. … Selected Publications … For further information contact the Group …
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Mission
JGI Mission As a U.S. Department of Energy Office of Science user facility supported by the … in Antarctica have been performed in the frame of italian expeditions of the Italian National Program for Antarctic … JGI History … Biological and Environmental Research Program Overview … Bioenergy … Environmental Microbiome Processes …
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Scientific Advisory Committee
… by the JGI Director to provide a scientific and technical overview of the JGI. The SAC is chartered to render advice, guidance, … new sequencing technologies, and related informatics; overview of the scientific programs at the JGI; and overview …
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