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Publication Policy
… The purpose of this policy is to establish communication norms around JGI contributions, … that the data produced by the facility result in scientific publications. JGI users and collaborators have the right to produce manuscripts for publication and the responsibility for leading the efforts …
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Single Cell Research Group
… Research in the Woyke laboratory focuses on the utility of single-cell methods to access genetic material of uncultivated taxa of interest. One such effort is targeted at environmental cells that are from candidate phyla, major branches in the … of  function-driven single-cell genomics . Here, single cells are characterized and selected as based on a specific …
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Mobile MUTE specifies subsidiary cells to build physiologically improved grass stomata
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Partnerships: Adopt-A-Genome
… “Adopt a Genome” is an informal program for faculty to “claim” the JGI’s unpublished microbial genomes, with the … faculty will work with undergraduates in the analysis and publication of the claimed genome sequences. This opportunity, provided by the Joint Genome Institute, builds upon thousands of microbial genomes that have been …
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Publications
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Metagenome Program
… The Metagenome Program uses advanced sequencing technologies to decode the genomes of microbes in their natural … micro-eukaryoes, along with their associated viruses and mobile genetic elements. Beyond exploring and characterizing … the Metagenome Program uses several experimental approaches to assess microbial activity across ecosystems.  By studying …
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Natural Prodcast Episode 9: Roger Linington
… episode 9 of Natural Prodcast. This week, Alison and I talk to Roger Linington, from Simon Fraser University in British Columbia, … but more recently, he’s been leading an effort to build The Natural Product Atlas , or NPAtlas, a freely … This episode features our conversation with Roger Linington , from Simon Fraser University . Roger is a natural …
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Plant Program
… user projects, the JGI’s Plant Program delves into the natural world’s potential to address global challenges by exploring plants’ role in capturing carbon, detoxifying soils, interacting with other organisms, and … understanding of plants’ biological and ecological roles to foster sustainable solutions for energy, agriculture and …
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Microbiome Data Science Team
… discoveries and catalyzing a major transition of biology into data science.  Research in the Kyrpides group focuses on … dark matter as well as the development of novel methods to enable large-scale comparative analysis, mining and … Camargo AP. et al. (2023) Identification of mobile genetic elements with geNomad. Nat Biotechnol . Epub. …
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Micro-Scale Applications Group
… that utilize microfluidics/microdroplet technology in order to enhance the quality of single-cell genomes and directly link functional information with individual cells. Research Team    … The JGI uniquely offers the first quantitative Stable Isotope Probing (SIP) Metagenomics pipeline that utilizes …
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Natural Prodcast Episode 23: Aaron Puri
… now I’m working on this the afternoon of the day I’m due to release it, which is not ideal for me keeping myself on … chemical biology, a lot of which people classify as tool building. So I worked with a really great guy named Matt … really, really important part of their ecology, are these cells communicating with one another. What can you tell us …
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Sequencing Technologies & Products
… Group is well-integrated across JGI departments to ensure a robust offering of sequencing capabilities and products to our users. This includes scaling the technologies and … collaborations with Science Programs and Operations teams to enable the JGI’s focus on expanding molecular …
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